Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mtr1g1282 ATGGCCCAATCTCTGGTATTCAAAGTGAAGAGGTGTGCCCCTGAATTTGTAAGACCCTCAAAACCAACACCTCATGAAATAAAATTACTTTCAGATATAGATGACCAAGAAGGGTTACGTTATCAAATGCCTGTGATACAATTTTACAACTATGTTCCAGTTATGGCAGAGAAAGATCCTGTTGATGTTATTAGAAAAGCATTAGCAAAAACACTTGTGTTTTATTATCCATTTGCAGGTAGGTTAAGGGAAGGTCCTGGTAGGAAACTTATGGTGGATTGCACTGGAGAAGGTGTTTTGTTTATTGAAGCTGATGCAGATGTTACCATTAAAGATTTGGGTGATACTCTTCATCCTCCATTTCGTTGTTTGGATGAACTTCTTTATGATGTTCTTGGTTCTTCAGATGTGCTTAACACTCCATTGCTGCTTATTCAGGTAACACGTTTGAAATGCGGTGGTTTCATTTTTGCTCTTCGTCTAAACCATACGATGAGTGACGCTGCTGGTTTGGTCCAATTCATGAATGCCTTAGGCAAAATTTCACGTGGGATGAACAAACCTTCAATCTCACCAGTATGGCATAGAGAGCTTCTAAACGCAAGGGATCCACCAAGAGTAACATGCACTCATCATGAATATGAACAAGTTCCCGACACCAAAGGAACAATTATCTCCTTAGATGCCACAATTCTCCGTTCTTTCTTCTTCGGTCCCACTGAGGTAGCCGCAATACGCGCTCTTCTTCCACCTCACCAACAAGAACACTCTAATTTTGAAATCCTCACTGCATTCCTTTGGCGTTGTCGTACAATTGCGTTACAACCAGACATCAACGGAGAAGTTCACATAGTCAACACGCATGGCAAGTTTATTAACCCACCCTTACCAAACGGTAACTACGGTAACAGTTTTGCATTTCCTGCTGCGGTTACAACTGCAGTAAAGAGCCGGCCTCATTTTACTGTGGTGAGATCATATCTAGTGGTTGATATTAAACATGCTGGTTTTAGAGAGGTTGATTTCGGTTGGGGAAAACCTTGTTATGGAGGACCAGCTAAAGGAGGAGTTGTTTCTAGTTCGTATATACCATTTAAAAATGCTAAAGGAATAGAAGGTTTGGTTATACCAGTTTGTTTGCCAACTAAAGCCATGGAGAGGTTCATTAAAGAGTTGGATGGTGTGCTTAAGAACAAAATTAACCAACCTACTATGGGTGGTCCAAAACCTAGATTCATAATTTCTCCCTTGTAA 1254 0.4059 MAQSLVFKVKRCAPEFVRPSKPTPHEIKLLSDIDDQEGLRYQMPVIQFYNYVPVMAEKDPVDVIRKALAKTLVFYYPFAGRLREGPGRKLMVDCTGEGVLFIEADADVTIKDLGDTLHPPFRCLDELLYDVLGSSDVLNTPLLLIQVTRLKCGGFIFALRLNHTMSDAAGLVQFMNALGKISRGMNKPSISPVWHRELLNARDPPRVTCTHHEYEQVPDTKGTIISLDATILRSFFFGPTEVAAIRALLPPHQQEHSNFEILTAFLWRCRTIALQPDINGEVHIVNTHGKFINPPLPNGNYGNSFAFPAAVTTAVKSRPHFTVVRSYLVVDIKHAGFREVDFGWGKPCYGGPAKGGVVSSSYIPFKNAKGIEGLVIPVCLPTKAMERFIKELDGVLKNKINQPTMGGPKPRFIISPL* 418
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mtr1g1282 417 Gene3D - 228 315 IPR023213 -
Mtr1g1282 417 Gene3D - 316 397 IPR023213 -
Mtr1g1282 417 Gene3D - 7 216 IPR023213 -
Mtr1g1282 417 PANTHER TRICHOTHECENE 3-O-ACETYLTRANSFERASE 9 316 - -
Mtr1g1282 417 PANTHER TRICHOTHECENE 3-O-ACETYLTRANSFERASE 315 401 - -
Mtr1g1282 417 Pfam Transferase family 325 391 - -
Mtr1g1282 417 Pfam Transferase family 8 313 - -
Mtr1g1282 417 PANTHER - 315 401 - -
Mtr1g1282 417 PANTHER - 9 316 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mtr1g1282 Mtr-Chr1 15264019 15266333 Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mtr1g1282 17 392 Monolignol Biosynthesis Gene Families AT5G48930 28.935 3.05e-36 135
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mtr1g1282 K19861 - gmx:100797017 595.504