Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mtr1g1280 ATGGCTCAATCTCTAGTATTCAAAGTGAAGAGGTGTGCCACTGAATTTGTAAGACCATCAAAACCAACACCTCATGAAATAAAATTACTTTCAGATATAGATGACCAAGAAGGATTACGTTATCAAACTCGTTTGATACAATTTTACAAGTATGATCCAAATATGGCAGGGAAAGACCCTGTTGATATTATTAGAAAAGCATTAGCAAAAACACTTGTGTTTTATTATCCATTTGCAGGTAGATTAAGGGAAGGTCCAAGTAGGAAACTTATGGTGGATTGTAATGATGAAGGTATTTTGTTTATTGAAGCTGATGCTGATGTTACTCTTGAACAATTTGGTGAAGATCTTCATCCTCCATTTCCTTGCATAGATGAGCTTCTTTATGATGTTCCTGGTTCTTCAGTTGTGCTTAACACTCCATTGCTGCTTATTCAGGTAACGCGTCTCAAGTGTGGTGGTTTCATATTTGCTCTTCGTCTAAACCATACAATTAGCGACTCATCAGGTTTATTTAAATTCTTAAGTGCCTTAGGAGAAATATCTCGCGGAATGAACGAACCTTCAATCTCACCGGTGTGGTGTAGAGAGCTTCTAAATGCAAGGAACCCACCAAGAATTACGTGTACTCATCACGAATATGAAGAAGTACCACGAAACAAAGGAACGGTCATTCCCTTAGACGACATGGTTCATCACACTTTCTTCTTTGGTCCCACCGAGGTAGCTGCAATTCGTTCTCTCCTTCCGGTTCATCCACTACAACAACACACCGACTTTGAAATCATCTCTGCATTTTGTTGGCGTTGTCGTACAATAGCATTACAACTAGATACTAACGAAGAAGTTCGTTTCATCTGCGTAGTTGATGGACGTAGTAAATCAGTTAACCTACAATTACCGAAAGGTTACTATGGTAACGCTTTAGCAAATTCAGCTATGGTAACAACCGCGGGAAAACTTATTGAAAATCCATTGGCGTACGCGTTGAATTTAGTTAAGAAAGCAAAAGCTAATGTCACCCAAGAGTACATGCATTCGATTGCGGATTTAATGGTTATCAAGGGTCGACCTCACTTTAATGTAGTAAAATCCTATCTTGTTTCTGACGTGACACGCGGCGGGTTTGAGAAGGTTGATTATGGTTGGGGGAAACCCATCTATGGAGGACCAGCTAGAGGAGCAGATGGTGATATTCCTGGTCTTGCTAGCTTTCATATACCTTTCAAAAATGCTAAAGGAGAGGAAGGTTTGGTTATACCATTTTATTTTCCAAATCAAGTCATGGAGAGGTTTGTTAAAGAAATGGATAGTGTGCTTAAGAGTAACACTAACAAGCCTACTAAGTGTGATAAAAAATCCGGTATCATTGTTTCTTCATTGTAG 1386 0.3911 MAQSLVFKVKRCATEFVRPSKPTPHEIKLLSDIDDQEGLRYQTRLIQFYKYDPNMAGKDPVDIIRKALAKTLVFYYPFAGRLREGPSRKLMVDCNDEGILFIEADADVTLEQFGEDLHPPFPCIDELLYDVPGSSVVLNTPLLLIQVTRLKCGGFIFALRLNHTISDSSGLFKFLSALGEISRGMNEPSISPVWCRELLNARNPPRITCTHHEYEEVPRNKGTVIPLDDMVHHTFFFGPTEVAAIRSLLPVHPLQQHTDFEIISAFCWRCRTIALQLDTNEEVRFICVVDGRSKSVNLQLPKGYYGNALANSAMVTTAGKLIENPLAYALNLVKKAKANVTQEYMHSIADLMVIKGRPHFNVVKSYLVSDVTRGGFEKVDYGWGKPIYGGPARGADGDIPGLASFHIPFKNAKGEEGLVIPFYFPNQVMERFVKEMDSVLKSNTNKPTKCDKKSGIIVSSL* 462
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mtr1g1280 461 Gene3D - 214 436 IPR023213 -
Mtr1g1280 461 Gene3D - 7 213 IPR023213 -
Mtr1g1280 461 PANTHER ALCOHOL ACYLTRANSFERASE 7 442 - -
Mtr1g1280 461 Pfam Transferase family 8 437 - -
Mtr1g1280 461 PANTHER TRICHOTHECENE 3-O-ACETYLTRANSFERASE 7 442 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mtr1g1280 Mtr-Chr1 15192021 15196495 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mtr1g1280 8 436 Monolignol Biosynthesis Gene Families AT5G48930 28.000 8.31e-45 160
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mtr1g1280 K19861 - gmx:100797017 652.129