Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mtr1g1279 ATGATAACCACTATCAAATTTAGTACCCTTTCTTCAATTATACCTTTCCTCATTATGGCCCAATCTCTCTTATTCACAGTGAAGAGAAGTGCCCCTGAATTTGTAAGACCATCAAAACCAACACCTCATGAAATAAAATTACTTTCAGACATAGATGACCAAGAAGGGTTACGTTTTCAAATTCCAGTGATACAATTTTATAAATATGATCCAAATATGGCAGGAAAAGACCCTGTTGATATTATTAGAAAAGCATTAGCAAAAACACTTGTGTTTTATTATCCATTTGCAGGTAGATTAAGGGAAGGTCCTGGTAGGAAACTTATGGTGGATTGCACTGGAGAAGGTGTTTTGTTTATTGAAGCTGATGCAGATGTTAGTTTGAAAGAATTTGGTGATGCTCTTCAACCTCCTTTTCCTTGTTTGGATGAGCTTCTTTTTGATGTTCCTGGTTCTTCAGAAGTGCTTAACTGTCCATTGTTGGTGATTCAGGTAACACGCCTCAAGTGCGGTGGTTTCATTTTTGCTCTTCGTCTAAACCATACAATGAGCGATGCAGCGGGTTTGGTCCAATTCATGAGTGCCTTAGGTGAAATTTCTTGCGGGATGAATGAACCTTCAATCTTACCGGTATGGCATAGGGAGCTTCTAAATTCAAGGGATCCACCGAGAGTAACATGCACTCATCGTGAATACGAACAAGTTCCCGACACCAAAGGAACAATTATTCCCTTAGATGACATGGCTCATCGCTCTTTTTTCTTCGGTCCAACCGAGGTAGCAAAAATTCGCGCTCTTCTCCCGCCTCACCAACAAAAACAATCCAATTTTGAAATCCTCACTGCATGCCTTTGGCGTTGTCGTACAATCGCGTTACAACCAGACACTGACGAAGAAGTTCGCATAATCTGCATTGTCAATGCTCGTGGCAAGTTTAATCCACCGTTGCCAAACGGTTACTACGGTAATGCTTTTGCATTTCCTGTCGCGGTTACAACCGCGGGGAAACTAATGGAAAATCCATTAGGGTATGCACTAGAGTTAGTTAAAAAAGCTAAATCTGATGTAACTCAAGAATACATGCATTCAGTTGCAGATTTAATGGTTATCAAGGGTCGACCACATTTTACTGTGGTTAGAAGTTATCTTGTGTCTGATGTGACACGTGCCGGATTCGGAGATGTTGAATTTGGTTGGGGAAAAGCTGTATATGGTGGACCAGCTAAAGGAGGAGTTGGTGCTATACCTGGTGTTGCTAGCTTTTATATACCTTTCAAAAATGCTAAAGGAGAGGAAGGTTTGGTTATACCACTTTGTTTACCAGCTCAAGCCATGGAGAAGTTCGTTAAAGAGTTAGATAGTGTGCTTAAGAACAACATCAACCAACCTACTATTGGTGGTCCAAAACCTAGTTTCATTATTTCTTCCTTGTAG 1434 0.4059 MITTIKFSTLSSIIPFLIMAQSLLFTVKRSAPEFVRPSKPTPHEIKLLSDIDDQEGLRFQIPVIQFYKYDPNMAGKDPVDIIRKALAKTLVFYYPFAGRLREGPGRKLMVDCTGEGVLFIEADADVSLKEFGDALQPPFPCLDELLFDVPGSSEVLNCPLLVIQVTRLKCGGFIFALRLNHTMSDAAGLVQFMSALGEISCGMNEPSILPVWHRELLNSRDPPRVTCTHREYEQVPDTKGTIIPLDDMAHRSFFFGPTEVAKIRALLPPHQQKQSNFEILTACLWRCRTIALQPDTDEEVRIICIVNARGKFNPPLPNGYYGNAFAFPVAVTTAGKLMENPLGYALELVKKAKSDVTQEYMHSVADLMVIKGRPHFTVVRSYLVSDVTRAGFGDVEFGWGKAVYGGPAKGGVGAIPGVASFYIPFKNAKGEEGLVIPLCLPAQAMEKFVKELDSVLKNNINQPTIGGPKPSFIISSL* 478
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mtr1g1279 477 PANTHER TRICHOTHECENE 3-O-ACETYLTRANSFERASE 24 461 - -
Mtr1g1279 477 PANTHER - 24 461 - -
Mtr1g1279 477 Gene3D - 233 452 IPR023213 -
Mtr1g1279 477 Pfam Transferase family 31 452 - -
Mtr1g1279 477 Gene3D - 26 232 IPR023213 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mtr1g1279 Mtr-Chr1 15172975 15176217 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mtr1g1279 35 452 Monolignol Biosynthesis Gene Families AT5G48930 28.995 1.23e-45 163
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mtr1g1279 K19861 - gmx:100797017 784.637