Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mtr1g1274 ATGCAAGTAAAGTTTCTAACTAAGAAATCAGATGTTTTCTCTTATGGAGTGGTGTTGATTGAAGTTATATGTGGAAAACCTGCTTTAGATGATGCCCTTCCAACGCAACAGATGAATTTGGCATTGTGGGCATTAAGTTGCGATAAAAAGGGTACCTTTCATGAAATGATGGACCCATATTTGATTGGCAAAGTGAATATGGATTCTCTAAACAAGGTTTTAGAGTTGGCATGGAAGTGCTTGGAGGAGCGTCGGGAGAACAGACCACCGATGGGGTATGTATTATGTCAACTAGAAGAGGCTCTCCATCTTGAGTTGGCATCACATGTTTCGAATGAGAATGAGGATTCTTCTATTCACTCCAGTGTAGGAAGTGGATTTACGGATGAAATTGAAGATGTTGTTTGA 408 0.3995 MQVKFLTKKSDVFSYGVVLIEVICGKPALDDALPTQQMNLALWALSCDKKGTFHEMMDPYLIGKVNMDSLNKVLELAWKCLEERRENRPPMGYVLCQLEEALHLELASHVSNENEDSSIHSSVGSGFTDEIEDVV* 136
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mtr1g1274 135 PANTHER BNAC03G27170D PROTEIN 6 119 - -
Mtr1g1274 135 Pfam Protein tyrosine and serine/threonine kinase 5 95 IPR001245 GO:0004672|GO:0006468
Mtr1g1274 135 SUPERFAMILY Protein kinase-like (PK-like) 5 100 IPR011009 -
Mtr1g1274 135 Gene3D Transferase(Phosphotransferase) domain 1 2 105 - -
Mtr1g1274 135 PANTHER OS07G0166700 PROTEIN 6 119 IPR045272 GO:0004714|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mtr1g1274 Mtr-Chr1 15111219 15111626 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mtr1g1274 1 126 Receptor kinase-like Gene Family AT2G23200 41.270 8.38e-29 108
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_CrRLK1L-1 Mtr1g1274 PK_Tyr_Ser-Thr 1.8e-05 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mtr1g1274 - - mtr:MTR_1g040130 265.774