Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mtr1g1255 ATGCTTTTATTTCCAATGCGTTGTGTTTTTTTGTTCTTTTGTATGTTTGTAATGGCCACATCACCTCTTGCTTCAGCAAATATGCAAAGCAGCGAGGCAAATGCTCTATTGAAATGGAAAGCAAGCTTTGACAACCAAAGCAAGGCTTTGCTCTCTTCATGGATTGGTAATAAGCCTTGCAATTGGGTGGGAATCACATGTGATGGCAAGTCAAAATCTATCTACAAGATACATCTTGCAAGTATTGGACTGAAAGGTACACTTCAAAGTCTCAATTTTTCATCACTTCCAAAAATCCATAGCTTAGTTTTAAGAAACAACTCATTCTATGGAGTTGTTCCACACCATATTGGTCTAATGTGCAATCTAGACACTCTTGATTTGTCACTAAATAAACTCTCTGGTAGCATTCACAATAGCATTGGTAATTTGTCAAAACTATCCTATCTTGATCTTAGCTTCAATTATCTCACTGGGATTATCCCAGCTCAGGTAACCCAATTGGTTGGTCTTTATGAATTTTATATGGGTAGTAACAACGATTTAAGTGGCTCCCTCCCTCGAGAAATTGGTAGAATGAGAAATTTGACAATACTTGATATTTCTTCATGCAATCTGATAGGGGCTATACCAATCTCGATAGGAAAGATAACCAACTTGTCACATCTTGATGTATCACAAAACCACCTTTCTGGAAACATTCCTCATGGAATTTGGCAAATGGACTTAACTCATTTGTCACTTGCAAATAATAATTTTAATGGTTCCATCCCACAAAGTGTTTTCAAGTCACGAAACCTGCAGTTTCTTCATCTTAAAGAAAGTGGTCTTTCTGGTTCTATGCCTAAGGAGTTTGGGATGTTGGGTAATTTAATAGATATGGATATTAGTAGCTGCAATCTCACTGGGTCAATCTCTACTTCTATAGGAAAATTGACCAATATATCATATCTCCAGTTATACCACAACCAACTTTTTGGCCACATTCCTCGCGAAATTGGGAATTTGGTCAACCTCAAGAAACTCAATCTTGGATATAATAATCTTTCTGGTTCCGTTCCTCAAGAAATAGGATTTCTAAAACAACTTTTTGAACTTGATTTGTCTCAGAACTATCTCTTTGGCACAATCCCTTCTGCAATCGGAAACTTGAGCAATTTACAATTACTTTACCTATATAGCAATAATTTCAGTGGTAGACTTCCTAATGAAATTGGAGAGCTTCATTCTCTTCAAATATTTCAATTGTCTTATAATAACCTATATGGACCTATCCCAGCATCCATAGGTGAGATGGTCAATTTGAATTCTATTTTCCTTGATGCAAATAAATTCTCAGGACTTATTCCACCTTCTATAGGTAACCTTGTCAATTTGGATACTATTGACTTTTCACAAAATAAACTCTCTGGACCACTTCCTTCCACTATCGGAAATTTAACGAAAGTAAGTGAATTATCTTTTCTCTCAAATGCTCTCTCTGGAAATATTCCAACAGAAGTGAGTTTGCTTACCAATTTAAAAAGTCTCCAGCTAGCTTATAATAGTTTCGTAGGTCATTTACCTCACAATATTTGTTCTAGCGGGAAATTGACACGCTTTGCTGCTCATAATAACAAATTCACTGGTCCAATTCCAGAGAGTTTGAAGAACTGTTCTAGCCTTATAAGATTGAGACTTAACCAAAACAAAATGACAGGAAATATAACAGATAGTTTTGGTGTGTATCCAAATTTGGACTACATAGAATTAAGTGATAATAATTTTTATGGTTATCTTTCTCCAAATTGGGGGAAGTGCAAGAATCTGACAAGCCTTAAAATCTCCAATAATAATTTAATAGGAAGCATACCACCAGAATTGGCTGAAGCAACCAATTTACATATACTTGACTTGTCCTCAAATCAACTTATAGGAAAAATTCCAAAGGATCTAGGAAACTTATCTGCACTGATCCAACTCTCGATAAGTAATAATCATCTTTCGGGAGAAGTTCCTATGCAGATTGCATCATTGCATGAACTAACTACATTGGATCTTGCAACAAATAATTTAAGTGGTTTTATCCCTGAAAAACTTGGAAGGTTGTCTAGGTTATTGCAGTTGAATTTGAGCCAAAATAAGTTTGAAGGAAACATTCCTGTTGAACTTGGTCAATTGAATGTTATTGAAGATCTTGATCTTAGCGGGAATTTTTTGAATGGAACCATACCAACAATGCTTGGACAGTTAAATCGCTTAGAAACATTGAATCTCTCACATAATAATCTCTATGGTAACATTCCCTTAAGCTTTTTTGATATGTTAAGTTTGACAACTGTTGATATATCTTACAACCGGTTGGAGGGTCCAATTCCAAACATTACAGCATTCCAAAGAGCTCCAGTTGAAGCATTTAGAAATAACAAAGGCTTGTGCGGTAATGTCTCTGGCCTAGAGCCTTGCTCAACATCAGGTGGAAACTTCCATAGTCATAAAACTAACAAAATTTTGGTGCTAGTTTTATCCCTCACTCTAGGCCCTTTATTGTTAGCATTATTTGTTTATGGGATCTCATACCAATTTTGTTGCACTTCAAGCACAAAAGAAGACAAGCATGTAGAAGAATTTCAAACTGAAAATCTATTTACAATATGGAGCTTTGATGGAAAAATGGTGTATGAGAATATCATCGAAGCCACAGAAGATTTTGACAACAAGAATCTCATCGGGGTTGGAGTACATGGAAGTGTTTACAAAGCAGAGTTGCCAACAGGTCAAGTGGTAGCTGTGAAGAAACTCCATTCACTACCAAATGGAGATGTATCTAATCTAAAAGCTTTTGCAGGTGAGATTAGTGCTTTGACAGAAATCCGACATCGCAACATTGTAAAGTTATATGGGTTTTGTTCACATCGACTACACTCATTTTTGGTTTATGAATTCTTGGAGAAGGGTAGCTTGGACAACATTTTGAAGGACAATGAACAAGCTAGTGAATTTGATTGGAGTAGGAGGGTGAATATCATTAAAGATATAGCTAATGCTTTATTCTATCTACATCATGACTGCTCACCTCCTATTGTTCATCGAGATATATCCAGCAAGAATGTTATTTTGGATTTGGAATGTGTAGCTCATGTCTCAGACTTTGGAACATCTAAGTTTCTAAATCCCAATTCATCGAATATGACTTCTTTTGCAGGCACCTTTGGATATGCTGCTCCAGAACTTGCATACACAATGGAAGTAAATGAGAAATGTGATGTGTATAGTTTTGGGATTTTAACCTTGGAAATACTTTTCGGAAAGCACCCTGGAGATGTTGTAACTTCTTTGTGGCAACAATCTTCAAAAAGTGTCATGGACCTGGAACTTGAATCTATGCCATTGATGGATAAGTTGGATCAACGTCTCCCTCGTCCAACAGATACCATTGTTCAAGAGGTGGCATCGACGATAAGGATTGCAACTGCTTGCTTGACTGAAACCCCACGTTCTCGCCCTACCATGGAGCAGGTCTGCAAGCAGCTTGTAATGTCTTAA 3525 0.3662 MLLFPMRCVFLFFCMFVMATSPLASANMQSSEANALLKWKASFDNQSKALLSSWIGNKPCNWVGITCDGKSKSIYKIHLASIGLKGTLQSLNFSSLPKIHSLVLRNNSFYGVVPHHIGLMCNLDTLDLSLNKLSGSIHNSIGNLSKLSYLDLSFNYLTGIIPAQVTQLVGLYEFYMGSNNDLSGSLPREIGRMRNLTILDISSCNLIGAIPISIGKITNLSHLDVSQNHLSGNIPHGIWQMDLTHLSLANNNFNGSIPQSVFKSRNLQFLHLKESGLSGSMPKEFGMLGNLIDMDISSCNLTGSISTSIGKLTNISYLQLYHNQLFGHIPREIGNLVNLKKLNLGYNNLSGSVPQEIGFLKQLFELDLSQNYLFGTIPSAIGNLSNLQLLYLYSNNFSGRLPNEIGELHSLQIFQLSYNNLYGPIPASIGEMVNLNSIFLDANKFSGLIPPSIGNLVNLDTIDFSQNKLSGPLPSTIGNLTKVSELSFLSNALSGNIPTEVSLLTNLKSLQLAYNSFVGHLPHNICSSGKLTRFAAHNNKFTGPIPESLKNCSSLIRLRLNQNKMTGNITDSFGVYPNLDYIELSDNNFYGYLSPNWGKCKNLTSLKISNNNLIGSIPPELAEATNLHILDLSSNQLIGKIPKDLGNLSALIQLSISNNHLSGEVPMQIASLHELTTLDLATNNLSGFIPEKLGRLSRLLQLNLSQNKFEGNIPVELGQLNVIEDLDLSGNFLNGTIPTMLGQLNRLETLNLSHNNLYGNIPLSFFDMLSLTTVDISYNRLEGPIPNITAFQRAPVEAFRNNKGLCGNVSGLEPCSTSGGNFHSHKTNKILVLVLSLTLGPLLLALFVYGISYQFCCTSSTKEDKHVEEFQTENLFTIWSFDGKMVYENIIEATEDFDNKNLIGVGVHGSVYKAELPTGQVVAVKKLHSLPNGDVSNLKAFAGEISALTEIRHRNIVKLYGFCSHRLHSFLVYEFLEKGSLDNILKDNEQASEFDWSRRVNIIKDIANALFYLHHDCSPPIVHRDISSKNVILDLECVAHVSDFGTSKFLNPNSSNMTSFAGTFGYAAPELAYTMEVNEKCDVYSFGILTLEILFGKHPGDVVTSLWQQSSKSVMDLELESMPLMDKLDQRLPRPTDTIVQEVASTIRIATACLTETPRSRPTMEQVCKQLVMS* 1175
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mtr1g1255 1174 Gene3D Ribonuclease Inhibitor 491 818 IPR032675 -
Mtr1g1255 1174 Gene3D Ribonuclease Inhibitor 287 403 IPR032675 -
Mtr1g1255 1174 PANTHER LRR RECEPTOR-LIKE KINASE FAMILY PROTEIN 8 173 - -
Mtr1g1255 1174 PANTHER LRR RECEPTOR-LIKE KINASE FAMILY PROTEIN 178 305 - -
Mtr1g1255 1174 PANTHER LRR RECEPTOR-LIKE KINASE FAMILY PROTEIN 388 1174 - -
Mtr1g1255 1174 PANTHER LRR RECEPTOR-LIKE KINASE FAMILY PROTEIN 274 420 - -
Mtr1g1255 1174 SUPERFAMILY RNI-like 77 398 - -
Mtr1g1255 1174 Pfam Leucine rich repeat N-terminal domain 31 68 IPR013210 -
Mtr1g1255 1174 Gene3D Ribonuclease Inhibitor 29 178 IPR032675 -
Mtr1g1255 1174 SMART LRR_sd22_2 312 338 - -
Mtr1g1255 1174 SMART LRR_sd22_2 624 650 - -
Mtr1g1255 1174 SMART LRR_sd22_2 217 236 - -
Mtr1g1255 1174 SMART LRR_sd22_2 120 146 - -
Mtr1g1255 1174 SMART LRR_sd22_2 456 488 - -
Mtr1g1255 1174 SMART LRR_sd22_2 360 386 - -
Mtr1g1255 1174 SUPERFAMILY RNI-like 462 783 - -
Mtr1g1255 1174 PANTHER LEUCINE RICH REPEAT FAMILY PROTEIN, EXPRESSED 178 305 - -
Mtr1g1255 1174 PANTHER LEUCINE RICH REPEAT FAMILY PROTEIN, EXPRESSED 388 1174 - -
Mtr1g1255 1174 PANTHER LEUCINE RICH REPEAT FAMILY PROTEIN, EXPRESSED 8 173 - -
Mtr1g1255 1174 PANTHER LEUCINE RICH REPEAT FAMILY PROTEIN, EXPRESSED 274 420 - -
Mtr1g1255 1174 Pfam Protein kinase domain 898 1170 IPR000719 GO:0004672|GO:0005524|GO:0006468
Mtr1g1255 1174 Gene3D Phosphorylase Kinase; domain 1 856 975 - -
Mtr1g1255 1174 SUPERFAMILY Protein kinase-like (PK-like) 878 1171 IPR011009 -
Mtr1g1255 1174 ProSiteProfiles Leucine-rich repeat profile. 626 649 IPR001611 GO:0005515
Mtr1g1255 1174 Pfam Leucine rich repeat 97 157 IPR001611 GO:0005515
Mtr1g1255 1174 Pfam Leucine rich repeat 314 373 IPR001611 GO:0005515
Mtr1g1255 1174 Pfam Leucine rich repeat 602 661 IPR001611 GO:0005515
Mtr1g1255 1174 ProSitePatterns Tyrosine protein kinases specific active-site signature. 1021 1033 IPR008266 GO:0004672|GO:0006468
Mtr1g1255 1174 PRINTS Leucine-rich repeat signature 147 160 - -
Mtr1g1255 1174 PRINTS Leucine-rich repeat signature 744 757 - -
Mtr1g1255 1174 ProSiteProfiles Protein kinase domain profile. 897 1173 IPR000719 GO:0004672|GO:0005524|GO:0006468
Mtr1g1255 1174 ProSitePatterns Protein kinases ATP-binding region signature. 903 926 IPR017441 GO:0005524
Mtr1g1255 1174 Gene3D Transferase(Phosphotransferase) domain 1 976 1174 - -
Mtr1g1255 1174 Gene3D Ribonuclease Inhibitor 404 490 IPR032675 -
Mtr1g1255 1174 Gene3D Ribonuclease Inhibitor 179 286 IPR032675 -
Mtr1g1255 1174 SMART LRR_typ_2 144 168 IPR003591 -
Mtr1g1255 1174 SMART LRR_typ_2 744 768 IPR003591 -
Mtr1g1255 1174 SMART LRR_typ_2 120 143 IPR003591 -
Mtr1g1255 1174 SMART LRR_typ_2 672 696 IPR003591 -
Mtr1g1255 1174 SMART LRR_typ_2 456 480 IPR003591 -
Mtr1g1255 1174 SMART LRR_typ_2 336 360 IPR003591 -
Mtr1g1255 1174 SMART LRR_typ_2 217 241 IPR003591 -
Mtr1g1255 1174 SMART LRR_typ_2 625 648 IPR003591 -
Mtr1g1255 1174 SMART LRR_typ_2 504 528 IPR003591 -
Mtr1g1255 1174 SMART LRR_typ_2 312 335 IPR003591 -
Mtr1g1255 1174 SMART LRR_typ_2 384 408 IPR003591 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mtr1g1255 Mtr-Chr1 14874934 14878798 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mtr1g1255 5 622 Receptor kinase-like Gene Family AT4G08850 35.240 3.45e-99 337
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-XI-1 Mtr1g1255 Pkinase 3.9e-46 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mtr1g1255 - - mtr:MTR_1g040615 1478.77