Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mtr1g1252 ATGGTGTACGAGAACATTATCGAAGCCACAAAAGATTTTGACAACAAGCATCTCATTGGGGTTGGAGGACATGGAAGTGTTTACAAAGCAGAGTTGCCTACAGGACAGGTTGTAGCTGTGAAGAAACTCCATTCATTACAAAATGGAGAAATGTCCAATCTGAAAGCTTTTGCAAGTGAGATCCAACCTTTAGCAGAAATCCGACATCGAAACATTGTGAAGTTATACGGGTATTGTTCACATCTATTGCACTCATTTTTGGTTTATGAGTTCTTGGAGAAGGGTAGTCTGGATAAGATTTTGAAAGACGATGAGCAAGCTACTGTGTTTGGCTGGAATAGGAGGGTGATTGCCATTAAAGATGTAGCTAATGCTTTATACTACATGCATCATGATCGCTCACCTTCAATAGTTCATCGCGATATATCCAGTAAGAATATTGTTTTGGATTTGGAATATGTGGCTCATGTCTCAGATTTCGGAACAGCTAAGTTTCTTAATCCCGATAATTCCAATTGGACCTCTAATTTTGTAGGCACCTTTGGATACACTGCTCCAGAACTTACATACACAATAAACGTAAACGAGAAGTGTGATGTGTATAGTTTTGGAGTATTAAGCCTGGAAATACTTCTTGGAAAACATCCTGGAGATATTGTATCTACAATGTTGCAATCAAGTTCTGTAGGCCAAACAATTGATGCTGTGTTGTTGACTGATATCTTGGATCAACGACTCCCTTTTCCTACTAATGATATCAAGAAAGAGGTGGTATCAATTATAAGGATTGCATTTCATTGCTTAACTGAGAGCCCACATAGTCGCCCTACAATGGAGCAAGTTTGCAAGGAGATTGCAATATCAAAGTCATCTTCCAGGGGTTAA 885 0.3898 MVYENIIEATKDFDNKHLIGVGGHGSVYKAELPTGQVVAVKKLHSLQNGEMSNLKAFASEIQPLAEIRHRNIVKLYGYCSHLLHSFLVYEFLEKGSLDKILKDDEQATVFGWNRRVIAIKDVANALYYMHHDRSPSIVHRDISSKNIVLDLEYVAHVSDFGTAKFLNPDNSNWTSNFVGTFGYTAPELTYTINVNEKCDVYSFGVLSLEILLGKHPGDIVSTMLQSSSVGQTIDAVLLTDILDQRLPFPTNDIKKEVVSIIRIAFHCLTESPHSRPTMEQVCKEIAISKSSSRG* 295
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mtr1g1252 294 PANTHER LRR RECEPTOR-LIKE KINASE FAMILY PROTEIN 1 291 - -
Mtr1g1252 294 ProSitePatterns Tyrosine protein kinases specific active-site signature. 137 149 IPR008266 GO:0004672|GO:0006468
Mtr1g1252 294 Pfam Protein kinase domain 14 284 IPR000719 GO:0004672|GO:0005524|GO:0006468
Mtr1g1252 294 PANTHER LEUCINE RICH REPEAT FAMILY PROTEIN, EXPRESSED 1 291 - -
Mtr1g1252 294 ProSiteProfiles Protein kinase domain profile. 13 287 IPR000719 GO:0004672|GO:0005524|GO:0006468
Mtr1g1252 294 Gene3D Phosphorylase Kinase; domain 1 1 91 - -
Mtr1g1252 294 SUPERFAMILY Protein kinase-like (PK-like) 3 284 IPR011009 -
Mtr1g1252 294 ProSitePatterns Protein kinases ATP-binding region signature. 19 42 IPR017441 GO:0005524
Mtr1g1252 294 Gene3D Transferase(Phosphotransferase) domain 1 92 293 - -
Mtr1g1252 294 PIRSF ILK 2 292 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mtr1g1252 Mtr-Chr1 14842139 14843742 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mtr1g1252 3 186 Receptor kinase-like Gene Family AT4G08850 56.150 7.81e-67 223
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-XI-1 Mtr1g1252 Pkinase 1.5e-46 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mtr1g1252 - - mtr:MTR_0365s0020 473.781