Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mtr1g1249 ATGTTTTTGAAGGATAGTAACAGTAGTAACGGTAACGGCTACCACCACCATCAACCACCATCACAACCACCGTCAGGAATGGTGCAAACTCACCGTGCCCGTCGTGGCACTCGCCGTTCACGCGCTTCCGTTTCTTCTTCTTCTTCCACTGTTAGGGTTTCCGATACAGAACAACCGCCGCAACAGCAGCAACAACTACCTAATCGATCTCCTTGCACTGATTACGATATGGCGTATTTTCATTCCTATGCTCATCTCGGTATTCACCAAGAAATGATCAAGGATCGTGTGCGGACTGAAACTTATAGGGAAGCAATCATGCGGCATCAGAGTTTTATTGCTGGCAAAGTCGTAGTTGATGTTGGATGCGGTACAGGAATCCTTTCTATATTTTGTGCTCAGGCCGGTGCAAAGAGGGTGTACGCAGTTGATGCCAGTGACATTGCACTGCAGGCCAATGAAGTTGTTAAAGCAAATAACCTTTCTGATGTTGTCATTGTATTGCATGGACGAGTTGAGGATGTTGAAATTGATGAAGAGGTGGATGTTATAATTTCAGAATGGATGGGCTATATGCTTCTATATGAGAGCATGCTTGGGAGTGTTATTACTGCCAGAGATCGCTGGCTCAAACCTGGTGGTCTTATTCTTCCTTCGAGTGCAACGTTGTACATTGCTCCCGTCACACATACTGACAGATACAGTGACAGCGTTGACTTTTGGCGCAATGTTTATGGAATTGATATGTCTGCCATGTTATCATTAGCAAAACAGTGTGCATTTGAAGAACCTGCTGTGGAGACGATAACTGGTGAAAATGTTTTGACATGGCCACACGTGGTAAAATATATTGACAGTTATTCCGTCACTATCAATGAGTTAGAAACTGTAACATCGAACTTTAAGTTCAACTCAATGATGCGAGCTCCACTGCATGGTTTTGCATTTTGGTTTGATGTTGAGTTTAATGTGCCCACGATAGCACCAACCAATAATCATTCATCTACATCGGTTATTGAGAATCATCAGGTGAATGGTAGTTTGAGAAAAAAGCGAGCAAATCCAAGTGAAGCACTGGTCCTATCTACTGCTCCTGAGGACCCTCCAACACATTGGCAGCAGACATTGGTATACTTCTATGATCCTATTGAGCTGGAACAAGATCAAGTAATCGACGGTTTAGTGACATTGACACAAAGCAAAGAGAATGCTCGATTTATGAATATCCACCTTGAGTATACTTCAGGTAATCGATCGTATGTGAAAGAGTCTGTTATGAGATGA 1284 0.4307 MFLKDSNSSNGNGYHHHQPPSQPPSGMVQTHRARRGTRRSRASVSSSSSTVRVSDTEQPPQQQQQLPNRSPCTDYDMAYFHSYAHLGIHQEMIKDRVRTETYREAIMRHQSFIAGKVVVDVGCGTGILSIFCAQAGAKRVYAVDASDIALQANEVVKANNLSDVVIVLHGRVEDVEIDEEVDVIISEWMGYMLLYESMLGSVITARDRWLKPGGLILPSSATLYIAPVTHTDRYSDSVDFWRNVYGIDMSAMLSLAKQCAFEEPAVETITGENVLTWPHVVKYIDSYSVTINELETVTSNFKFNSMMRAPLHGFAFWFDVEFNVPTIAPTNNHSSTSVIENHQVNGSLRKKRANPSEALVLSTAPEDPPTHWQQTLVYFYDPIELEQDQVIDGLVTLTQSKENARFMNIHLEYTSGNRSYVKESVMR* 428
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mtr1g1249 427 SUPERFAMILY S-adenosyl-L-methionine-dependent methyltransferases 82 417 IPR029063 -
Mtr1g1249 427 MobiDBLite consensus disorder prediction 40 71 - -
Mtr1g1249 427 Gene3D Vaccinia Virus protein VP39 73 218 IPR029063 -
Mtr1g1249 427 Gene3D - 220 426 - -
Mtr1g1249 427 MobiDBLite consensus disorder prediction 1 28 - -
Mtr1g1249 427 CDD AdoMet_MTases 118 217 - -
Mtr1g1249 427 PANTHER BNAC03G41340D PROTEIN 25 424 - -
Mtr1g1249 427 PANTHER PROTEIN ARGININE N-METHYLTRANSFERASE 25 424 IPR025799 GO:0016274|GO:0018216
Mtr1g1249 427 ProSiteProfiles SAM-dependent methyltransferase PRMT-type domain profile. 76 410 IPR025799 GO:0016274|GO:0018216
Mtr1g1249 427 Pfam Ribosomal protein L11 methyltransferase (PrmA) 114 188 - -
Mtr1g1249 427 MobiDBLite consensus disorder prediction 1 71 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mtr1g1249 Mtr-Chr1 14802014 14814283 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mtr1g1249 79 393 C2H2 Transcription Factor Family AT3G12270 39.394 1.07e-66 221
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mtr1g1249 K11437 - gmx:100809174 655.981