Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mtr1g1235 ATGTCATCACTCTATTTATCCAAAAATAAAGAAACCAAGTTGAACCAAAATAGAAGTGTTCAATGCTTAGAAAACTTCAACTATTTCAGGACCAATAATGCACCTTCAAAAGGAAGCACAAATTTCCTAGCCTATAAATACAATTACTTCAACACAAGTTCTCTTCACCAACATACAACAATGGATAGTATACCATACATGCATCAAATGGTTTCTAGCTTGGTTTTGATAATTCTATCTATTTCTTCATTGGCTTCAGCATCTCTGCAGGTGGGTTTCTATAGCTACTCATGTCCATCTGCTGAGGCAATAGTGAGAAGTGCAATTGACAAAGCTGTTTCACTCAATCCTGGTATAGGTGCTGGATTGATTAGAATGCATTTTCATGATTGCTTTGTGAGGGGTTGTGATGCTTCTGTGTTACTAGCATCAACACCAGGAAATCCAATAGCTGAGAAAGACAACTTTATCAACAATCCAAGTCTACATGGATTTGAGGTAATTGATGAGGCCAAGGCTCAATTAGAAGTCGTATGTCCGCAAACAGTATCGTGTGCGGACATTCTTACATTTGCTACACGAGACAGTATTCTCAAACTTAGTGGTGGCACTATAAATTACGATGTACCTTCAGGACGGAGGGATGGCCGTGTCTCAATCAGCGACGAAGTGCCAAAAAATATACCTTCACCTTTCCTCAATGCTGACCAACTTATAGCAAATTTTGCACAAAAAGGTTTGTCAATTGATGAAATGGTTACACTCTCAGGAGCACATTCAATTGGTGTATCACATTGTTCTTCTTTCTCTAATCGTTTATATTCATTTAGTGATACAATTTCTCAAGATCCTTCTATGGACCCTTCATTTGCTGAATCTTTGAAAACAAAGTGTCCACCACCACCAAGTAACACTAATCCAATAGTGATGCTTGATGTTGCTACTCCTAATCGTTTGGACAATTTGTATTATGAGGGATTGATTAACCATCGTGGATTGTTGACTTCAGATCAAACCTTGTTGAGTAGTCAATCTACACAAGAAAGTGTGCTAAGTAATGCTAATTATGGTTCAAATTGGGCTACTAAGTTTGCACAAGCAATGGTGCATATGGGTTCTATTGATGTGTTAAGTGGCTATGATGGTGAGATTAGGAAACACTGCAGCTTTGTCAATTAG 1179 0.38 MSSLYLSKNKETKLNQNRSVQCLENFNYFRTNNAPSKGSTNFLAYKYNYFNTSSLHQHTTMDSIPYMHQMVSSLVLIILSISSLASASLQVGFYSYSCPSAEAIVRSAIDKAVSLNPGIGAGLIRMHFHDCFVRGCDASVLLASTPGNPIAEKDNFINNPSLHGFEVIDEAKAQLEVVCPQTVSCADILTFATRDSILKLSGGTINYDVPSGRRDGRVSISDEVPKNIPSPFLNADQLIANFAQKGLSIDEMVTLSGAHSIGVSHCSSFSNRLYSFSDTISQDPSMDPSFAESLKTKCPPPPSNTNPIVMLDVATPNRLDNLYYEGLINHRGLLTSDQTLLSSQSTQESVLSNANYGSNWATKFAQAMVHMGSIDVLSGYDGEIRKHCSFVN* 393
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mtr1g1235 392 SUPERFAMILY Heme-dependent peroxidases 89 392 IPR010255 GO:0004601|GO:0006979|GO:0020037
Mtr1g1235 392 Pfam Peroxidase 105 352 IPR002016 GO:0004601|GO:0006979|GO:0020037
Mtr1g1235 392 ProSitePatterns Peroxidases proximal heme-ligand signature. 251 261 IPR019793 -
Mtr1g1235 392 PRINTS Haem peroxidase superfamily signature 120 134 IPR002016 GO:0004601|GO:0006979|GO:0020037
Mtr1g1235 392 PRINTS Haem peroxidase superfamily signature 183 200 IPR002016 GO:0004601|GO:0006979|GO:0020037
Mtr1g1235 392 PRINTS Haem peroxidase superfamily signature 203 215 IPR002016 GO:0004601|GO:0006979|GO:0020037
Mtr1g1235 392 PRINTS Haem peroxidase superfamily signature 251 266 IPR002016 GO:0004601|GO:0006979|GO:0020037
Mtr1g1235 392 PRINTS Haem peroxidase superfamily signature 312 327 IPR002016 GO:0004601|GO:0006979|GO:0020037
Mtr1g1235 392 PRINTS Plant peroxidase signature 98 117 IPR000823 GO:0004601|GO:0006979|GO:0020037
Mtr1g1235 392 PRINTS Plant peroxidase signature 122 142 IPR000823 GO:0004601|GO:0006979|GO:0020037
Mtr1g1235 392 PRINTS Plant peroxidase signature 163 176 IPR000823 GO:0004601|GO:0006979|GO:0020037
Mtr1g1235 392 PRINTS Plant peroxidase signature 182 192 IPR000823 GO:0004601|GO:0006979|GO:0020037
Mtr1g1235 392 PRINTS Plant peroxidase signature 250 262 IPR000823 GO:0004601|GO:0006979|GO:0020037
Mtr1g1235 392 PRINTS Plant peroxidase signature 310 325 IPR000823 GO:0004601|GO:0006979|GO:0020037
Mtr1g1235 392 PRINTS Plant peroxidase signature 326 343 IPR000823 GO:0004601|GO:0006979|GO:0020037
Mtr1g1235 392 PRINTS Plant peroxidase signature 366 379 IPR000823 GO:0004601|GO:0006979|GO:0020037
Mtr1g1235 392 ProSitePatterns Peroxidases active site signature. 120 131 IPR019794 GO:0004601
Mtr1g1235 392 CDD secretory_peroxidase 90 391 IPR033905 GO:0004601|GO:0042744
Mtr1g1235 392 Gene3D - 92 392 - -
Mtr1g1235 392 PANTHER PEROXIDASE 79 390 - -
Mtr1g1235 392 Gene3D Peroxidase, domain 2 229 371 - -
Mtr1g1235 392 PANTHER PEROXIDASE 25-RELATED 79 390 IPR000823 GO:0004601|GO:0006979|GO:0020037
Mtr1g1235 392 ProSiteProfiles Plant heme peroxidase family profile. 88 392 IPR002016 GO:0004601|GO:0006979|GO:0020037
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mtr1g1235 Mtr-Chr1 14615419 14617665 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mtr1g1235 74 392 Peroxidase AT4G11290 45.370 6.19e-91 275
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mtr1g1235 K00430 - gmx:100786791 460.299