Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mtr1g1230 ATGTGGAAGCCAGTTTTGGTTATGATTCTAGTTAATTTAGCTTTAGCTTTTGTCAATATATTTCTGAAGAAGATTCTTAATGAAGGAATGGACCATTTAACCATTTTAACATATCGACAGGCAATTTCAGCTATTTGTTTGGCACCTATTGCTTGCTTCTTTGAAAGGGAAAGCAAGATAAATGGTCATATTATATGTCTGCTTTTCTTTAGTGCTCTTGTAGGAGCAACACTCACACAATACCTCTATCTTGTTGGACTTAAATATACATCAGCAACATTCGCATCTGCATTCCTCAATACGGTGCCTGTATTCACGTTCATTTTGGCACTGCCAATGGGGATGGAAAAAATGAGCATGAAAAGCAAGAGTGGTAAAGCCAAAATCTTGGGAACTTTTGTGTGTATTGGTGGAGCTTTGGTATTGGTCCTTTATAAAGGAATGCCCATAATCAACCCACAATCTCATAACATAGCAGGCAAAGCCACAACACCAGAACCAGCCTCCAGTTTAAAGAAATGGATTATGGGTTCAATATTTCTTACAGTAGGTTGCGTTTTCTGGTCTTCATGGTTTCTTATACAAGAAAGGATTGGCAAAAAGTATCCATATCGATACTCTAGCACAGCCATTATATCACTCTTTGCTGCCATTCAATCCGCAATATTAAATTTGATCATCCATAGAAATAATGCCAAATGGATTCTCAAAGGAAAGCTACAAATAATGACTGTTGTATACTCTGGGCTGGTGGGATCAGGCTTGTGCTATGTGGCAATGGCATGGTGTGTCAAACAAAAGGGACCAGTTTTTACAGCAGCATTTACCCCACTTATACAGATGTTTGTGGCTGTGCTTGATCTTTGTATATTACAAGAGGAAATTTATCTAGGAAGTGTTGTAGGATCAGTCTTGGTTATTTCTGGCATGTATATGCTCCTATGGGGTAAAAGTAAAGAGAGGGAACAATGTGCCTTGAAGGACACTCAAGAAAATCAAAAAGATGAAGAATGTCACTAA 1020 0.3804 MWKPVLVMILVNLALAFVNIFLKKILNEGMDHLTILTYRQAISAICLAPIACFFERESKINGHIICLLFFSALVGATLTQYLYLVGLKYTSATFASAFLNTVPVFTFILALPMGMEKMSMKSKSGKAKILGTFVCIGGALVLVLYKGMPIINPQSHNIAGKATTPEPASSLKKWIMGSIFLTVGCVFWSSWFLIQERIGKKYPYRYSSTAIISLFAAIQSAILNLIIHRNNAKWILKGKLQIMTVVYSGLVGSGLCYVAMAWCVKQKGPVFTAAFTPLIQMFVAVLDLCILQEEIYLGSVVGSVLVISGMYMLLWGKSKEREQCALKDTQENQKDEECH* 340
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mtr1g1230 339 Pfam EamA-like transporter family 3 143 IPR000620 GO:0016020|GO:0016021
Mtr1g1230 339 Pfam EamA-like transporter family 176 314 IPR000620 GO:0016020|GO:0016021
Mtr1g1230 339 SUPERFAMILY Multidrug resistance efflux transporter EmrE 38 146 - -
Mtr1g1230 339 PANTHER WAT1-RELATED PROTEIN 5 339 IPR030184 GO:0016021|GO:0022857
Mtr1g1230 339 PANTHER WAT1-RELATED PROTEIN 5 339 - -
Mtr1g1230 339 SUPERFAMILY Multidrug resistance efflux transporter EmrE 239 320 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mtr1g1230 Mtr-Chr1 14569594 14573093 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mtr1g1230 2 322 Nodulin-like Gene Family AT1G11460 40.741 1.85e-82 252
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mtr1g1230 - - gmx:100794199 515.768