Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mtr1g1216 ATGGCAAGTGTTGTTGCAGAAGCGTTCCTATCAGCTTTTGTGGAGGTTTTGCTGGAAAAGATGATTTCAACCGAGTTTGTGAACTTCATTCGGAGCAAGAAACTTGACATTTCACTCTTGGAAAAGCTAAAATTAACATTGCTGAGTCTTCAAGCTGTACTGAATGATGCTGAAGAGAAACAAATCACCAATCCTGCTGTCAAGCAATGGCTGGGTAACCTGCGAGATGTTGTCTTTGAAGCTGATGATTTGTTAGACAAAATCAATACCGAGGCATTAAGAAGTAAAGTGAATAAGGTGCGGAACATTCTTTCTTCTAATTTCAAACAGTCTTATGGATTGGTCAATTTTGATATTCAAAGATTATTTGAAAGATTGGAACACTTTGCACGGAAAGGACACGTGCTTGGATTGAAAGAAGGTGTTTCTTGCAGTGTTTGGAATGGAACTCCTACAAGTTCTGTGTTGGATGAATCTGCTATTTATGGCAGAGATGGTGACAGAAAAAAACTTCAAGAACTTTTGCTGCATGCTAGTGATGATGGCAACAAAATAGGAGTGATTTCCATTGTGGGAATGGGAGGCTTGGGTAAAACAACTCTTGCTAAACTTCTTTACAACGATCCGGAAGTAAAGGAGAAATTTGATTTGAAAGGGTGGGCATATATCTCAAAAGATTTTGATATTGTCCGGGTCACTAAAACCCTTCTTGAATCTGTTACTTTTAAAACAATTGATGCCAATAACATGAATACCATGCATACGGAATTTGTCACTTCAAAAATAACCGACACTGGTGACCTGAATACTCTACAGGTGCAACTGCAGCAAAGTTTAATCCATAAAAGGTTTTTGCTAGTACTGGATGACATGTGGGATGGAAGTTATGTGGATTGGAACAATCTCAAAGACATCTTTAATGTTGGGGAAATGGGAAGTAAGATCATCATCACAACACGAGATGAAAGAGTTGCACTAGTCACGCAAACCTTTCTTCCTATCCACTATTTGGCACCCATGCAAAGTGATGAATGTTGGTCTTTACTTTCAAAACATGCATTTGGAGCAAGTAACTACAGGCTCCGGTCCAATCTAGAAGCAATTGGGAAAGAAATTGCCAAAAAATGTGATGGTTTACCGTTAGCTGCTGTAGCACTTGGGGGTCTTCTCCGCACCAAACTGTCACAGGATGACTGGAATGATGTACTAAAAAGTAACATTTGGAATTTGCCAAATGTTGGGGTGCAGCAGACTCTTCTATCTAGCTATCATTATCTTCCGGCTCCTTTAAAAAGATGTTTTGCTTACTGTTCAATTTTTCCAAAGAACTCCATCTTGCAAAAAAATATGGTAGTTCAGTTATGGATGGCAGAAGGCTTGGTGCATAAGTCCAAAAGACAGAAAAGTTGGGAAAAAGTAGGAGAAGAATACTTTGATGAACTAGTGTCAAGGTCACTGATACGTCGTCGGTATATTGATGGGGAAGAATGCTATGAAATGCATGACCTTGTCAATGATTTAGCTACAATGGTTTCATCTCCATATTGCATCAAGTTAGACGAACATGAAATAAATGATAAGGTACGTCATTTGTCATGCATTAGAAGGAAATATGACTCGTACAGTAAATTTGATAAATTAAATGGACTTAAAGGTCTACGTACCTTCTTGGTCTTGCCATTACAAGAACCGGTGTGGTTAATCTATTCCATATCAGACAGGGTGGTACGCGAATTATTGCCAGCGATGAAACAATTACGCGTGCTGTCGTTGTCAAACTACAGGAGTATCACCGAGTTGCCCAATTCTATTGGAAATTTGATATGTCTGCGATACTTAAATCTCTCTAACACAGCGATTGAAAGGCTTCCGTCTGTAACATGCAACCTCTACAATCTGTTGACCTTGTTGTTGTTTGGTTGTTGGTGTCTTGTTGAATTGCCTGAGGACATCGTAAAATTGGTTAATCTACGCCACCTTGATATCAGAGGTACTCAATTGAAGGAGATGCCAGTACAAATAACCAGACTACAAAATCTTCAAACTTTGTCTGATTTTGCTATTAGCAATCATCGTGATGGATTGAAGGTTAGAGAGTTGGGAAAATTTCCGCATCTAAAGGGAAATCTTTCCATCTCAAATCTACAAAATATCACTGACCCCTTTGATGCTTTTGAAGCAAATTTGAAGATGAAAGAACAAATTGACAACTTGGAACTACAGTGGATTCTACATGGCAGCAGTGGCACTACTAGTCAAAGTTCACAAATTCAAGCACTTGTACTTCAACAACTTCAACCTTCAACAAATTTGAAGAATCTCACCATCAAAGGTTACGGTGGAACAAGCTTTCCGAATTGGTTGGGTGATTCATTATTTAGCAACATGGTGTATCTGCACATAAGTGGCTGTGATCATTGTTCTTTGCTGCCACCGCTTGGACAACTACATGGTTTGAAAAAACTCAGTATTGCCAGTATGAAATCGGTAAAGAGTCTTGGTTCTGAATTTTATGGAAATAGTAGTTGTCCTTCGTTTCAACCATTTCCTTCCTTGGAGACTCTGGAATTTGAAGAGATGCTCGAGTGGGAGGAATGGAACTTGACTGAAGCAACGAAGTTTCCCAGTCTGACAAATCTGTCACTGGAAACATGTTCTAAACTCAAAGGAAACATGCCTTGCAACCTTCCTTCGTTAACTACACTTGAGTTAAAGGTGTGTGATCTGCTTCTGGAGTCAAGGCACTCAGACGATCAAATCATCCAATCGATATGGTCTCCTCTTAATTCTCTACGGCAGTTGACTTTGGTCGGCTTTCCCTCTCTAATGTCTTTTCCAAGAGACGGTCTACCCAAAACCTTACAATCTCTCACCATCCATGATTGTGAAAATTTAAAATTCCTTCCTTGTGAATCCTTGCACAATTATTCATCACTCGAGGACATAAATATATTTTATAGTTGTAACTCTGCACATTTGATACATTGA 2988 0.3912 MASVVAEAFLSAFVEVLLEKMISTEFVNFIRSKKLDISLLEKLKLTLLSLQAVLNDAEEKQITNPAVKQWLGNLRDVVFEADDLLDKINTEALRSKVNKVRNILSSNFKQSYGLVNFDIQRLFERLEHFARKGHVLGLKEGVSCSVWNGTPTSSVLDESAIYGRDGDRKKLQELLLHASDDGNKIGVISIVGMGGLGKTTLAKLLYNDPEVKEKFDLKGWAYISKDFDIVRVTKTLLESVTFKTIDANNMNTMHTEFVTSKITDTGDLNTLQVQLQQSLIHKRFLLVLDDMWDGSYVDWNNLKDIFNVGEMGSKIIITTRDERVALVTQTFLPIHYLAPMQSDECWSLLSKHAFGASNYRLRSNLEAIGKEIAKKCDGLPLAAVALGGLLRTKLSQDDWNDVLKSNIWNLPNVGVQQTLLSSYHYLPAPLKRCFAYCSIFPKNSILQKNMVVQLWMAEGLVHKSKRQKSWEKVGEEYFDELVSRSLIRRRYIDGEECYEMHDLVNDLATMVSSPYCIKLDEHEINDKVRHLSCIRRKYDSYSKFDKLNGLKGLRTFLVLPLQEPVWLIYSISDRVVRELLPAMKQLRVLSLSNYRSITELPNSIGNLICLRYLNLSNTAIERLPSVTCNLYNLLTLLLFGCWCLVELPEDIVKLVNLRHLDIRGTQLKEMPVQITRLQNLQTLSDFAISNHRDGLKVRELGKFPHLKGNLSISNLQNITDPFDAFEANLKMKEQIDNLELQWILHGSSGTTSQSSQIQALVLQQLQPSTNLKNLTIKGYGGTSFPNWLGDSLFSNMVYLHISGCDHCSLLPPLGQLHGLKKLSIASMKSVKSLGSEFYGNSSCPSFQPFPSLETLEFEEMLEWEEWNLTEATKFPSLTNLSLETCSKLKGNMPCNLPSLTTLELKVCDLLLESRHSDDQIIQSIWSPLNSLRQLTLVGFPSLMSFPRDGLPKTLQSLTIHDCENLKFLPCESLHNYSSLEDINIFYSCNSAHLIH* 996
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mtr1g1216 995 Gene3D Ribonuclease Inhibitor 568 909 IPR032675 -
Mtr1g1216 995 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 152 437 IPR027417 -
Mtr1g1216 995 SUPERFAMILY L domain-like 500 979 - -
Mtr1g1216 995 Gene3D - 148 331 IPR027417 -
Mtr1g1216 995 PRINTS Disease resistance protein signature 187 202 - -
Mtr1g1216 995 PRINTS Disease resistance protein signature 278 292 - -
Mtr1g1216 995 PRINTS Disease resistance protein signature 376 390 - -
Mtr1g1216 995 PRINTS Disease resistance protein signature 894 910 - -
Mtr1g1216 995 Coils Coil 40 60 - -
Mtr1g1216 995 SMART LRR_typ_2 607 630 IPR003591 -
Mtr1g1216 995 SMART LRR_typ_2 654 677 IPR003591 -
Mtr1g1216 995 Gene3D - 423 510 IPR036388 -
Mtr1g1216 995 PANTHER OS05G0414200 PROTEIN 20 968 - -
Mtr1g1216 995 PANTHER DISEASE RESISTANCE PROTEIN RP 20 968 IPR044974 GO:0006952
Mtr1g1216 995 Pfam Rx N-terminal domain 9 101 IPR041118 -
Mtr1g1216 995 Gene3D - 340 422 IPR042197 -
Mtr1g1216 995 Gene3D - 14 117 - -
Mtr1g1216 995 Pfam NB-ARC domain 170 433 IPR002182 GO:0043531
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mtr1g1216 Mtr-Chr1 14395300 14398806 Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mtr1g1216 578 683 WRKY Transcription Factor Family AT4G12020 35.514 1.28e-07 54.3
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mtr1g1216 - - ccaj:109806283 1086.25