Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mtr1g1213 ATGGGTTTTACGGTCGCAGAGAGACTAAGGAGAGAAGAGTATGTGTTCCATGCAAAACTAGCACAACAAGCGGAACGCTACGAGGAGATGGTTTCCTTCATGCAGAAGATAGTTGTAGGGTACACACCAGCCTCAGAGCTTAGCTTGGAAGAGATGAACCTACTATCTGTCGCTTACAAGAACGCGACCGAACCACTTCGTGCGGCGTTGAGAATCCTTTCAAAGGAGGAAGAAGGTAGAAAGAATGAAGATGTTCACTTTGTGCATGTTAAGAAATACAAGTCCAAAGTTGAATCGGAGTTGGAGAATGTTTGTGGTAGTATTCTGGAGTTGCTGGATTCGAAACTTATACCTTCTGCTTCATCGAGTGAGATTAGGGTTGTTTATTATCAGATGAAAGGTGATTATCAAAGGTATATGGCTGAGTTTAAGATTGGTGATGACAAAAAATCTGCTGTTGAGGATATTATCTTGTCTTACAAGGCTGCACAGGATATTGCTGCTGCGGATCTTCGATCTTCTCATCCTATAAGATTGGGTTTGGCTTTGAATTTCTCGGTTTTCTATTATGAAATTCTTAACCGGTTTGACGAAGGTCTTGACATGGCTAGACAGGCTTTAGATGAAGCACGTAATGAGCTCAAATTGGGAGATGAATACTACAAAGACAGCACGGTTCGCATGCAACTTTTGAGAAACAACATCACCCTCTGGACTTTTGATGACACGGACCAGCTAGACGAGCATTGA 750 0.424 MGFTVAERLRREEYVFHAKLAQQAERYEEMVSFMQKIVVGYTPASELSLEEMNLLSVAYKNATEPLRAALRILSKEEEGRKNEDVHFVHVKKYKSKVESELENVCGSILELLDSKLIPSASSSEIRVVYYQMKGDYQRYMAEFKIGDDKKSAVEDIILSYKAAQDIAAADLRSSHPIRLGLALNFSVFYYEILNRFDEGLDMARQALDEARNELKLGDEYYKDSTVRMQLLRNNITLWTFDDTDQLDEH* 250
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mtr1g1213 249 SUPERFAMILY 14-3-3 protein 10 239 IPR036815 -
Mtr1g1213 249 SMART 1433_4 11 248 IPR023410 -
Mtr1g1213 249 PANTHER 14-3-3-LIKE PROTEIN D 9 244 - -
Mtr1g1213 249 PANTHER 14-3-3 PROTEIN 9 244 IPR000308 -
Mtr1g1213 249 Coils Coil 193 213 - -
Mtr1g1213 249 PIRSF 14-3-3 6 249 IPR000308 -
Mtr1g1213 249 Pfam 14-3-3 protein 18 239 IPR023410 -
Mtr1g1213 249 Gene3D - 2 249 IPR036815 -
Mtr1g1213 249 PRINTS 14-3-3 protein zeta signature 46 75 IPR000308 -
Mtr1g1213 249 PRINTS 14-3-3 protein zeta signature 93 117 IPR000308 -
Mtr1g1213 249 PRINTS 14-3-3 protein zeta signature 124 146 IPR000308 -
Mtr1g1213 249 PRINTS 14-3-3 protein zeta signature 159 185 IPR000308 -
Mtr1g1213 249 PRINTS 14-3-3 protein zeta signature 212 241 IPR000308 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mtr1g1213 Mtr-Chr1 14363786 14365050 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mtr1g1213 5 246 14-3-3 family AT5G10450 64.372 1.64e-106 307
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mtr1g1213 K06630 - pop:7468865 317.005