Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mtr1g1211 ATGGGAGGGATTGGAAAAACAACACTAGCTAAACTACTTTACAATGATCTTGAGGTAGGAAAGAATTTTGACCTAAAAGCTTGGGCATATATATCAAAGGATTTTGATGTTTGTAGGGTGACAAAAATTCTTCTTGAATGTGTCAGTTCAAAGCCGGTTGTCACGGATAACTTGAATACTCTACAAGTGGAGTTACAGCAAAGTTTGAGAAAAAAAAGATATTTGCTTGTTCTGGATGATGTCTGGGATGGAAGTTATGATGAATGGAACAAACTGAAGGCTGTTTTTGAAGCCGGGGAAGTGGGAAGTAAGATCGTCATCACAACACGGGATGAAAGTGTTGCATTAGCAATGCAAACTCATATTCCTGTCCACTATTTGAGATCTCTTCGTAGTGAAGATTGTTGGTCTTTACTTGCGCATCACGCATTTGGACCGAATAACTGCAAGGAACAATCGAAACTTGAAGTAATTGGCAAAGAAATTGCAAAAAGATGTGGTGGCTTGCCGTTAGCTGCAGAAGCCGTTGGGGGTCTTCTCCGCACCAAATTATCAGAAAAGAACTGGAATAAGGTATTAAAAAGTAACATCTGGGATTTGCCAAATATCAAAGTGCTACCGGCTCTTCTATTGAGCTATCACTATCTTCCTGCTCCTTTGAAGCGATGTTTTGCTTATTGTTCAATTTTTCCAAAGAACTCCGGTTTAGATAAGAAGATGGTGGTTCTGCTATGGATGGCAGAAGACTTGGTACATCAGTATAAAGGTGAAAAAACTGTAGAAGAGGTAGTAGAAGAATACTTTGATGAACTTGTATCACGGTCGCTAATACGTAGACAGATGGTCAATGCGAAAGAAAGCTTCATGATGCATGACCTTATCAATGAATTAGCAACAACTGTTTCATCTGCATTTTGTATCAGGCTTGAGGATCCAAAGCCATGTGAAAGTCTTAAAAGAGCTCGTCATTTGTCATACATTCGAGGGAATTATGACTGCTTCAATAAATTCAATATGTTTCATGAATCAAAGTGTCTTCGAACCTTACTAGCCTTACCGTTAAGACATTGGTGGTCATCAAAATATCCTAATCTGAGAAGCCATTATCTATCAAGCAAGTTACTATTTGATTTGTTACCTGCAATGAAACGGTTGAGGGTGTTATCTTTGTCACACTATAACAATATCACTGAGTTGCCTAACTCTTTCGTAAATTTAATACATCTGCGGTATTTAGATCTCTCCAACACTAAAATAGAAAAATTGCCAGATGTAATATGCAAGCTCTACAATCTTCAAACCTTATTGTTGTCGAAATGTAGCTCTCTTACTGAATTACCCGAGGACATTGGAAATTTGGTTAATCTACGTCACCTCGATTTAAGTGACACTAAGTTGAAGGTGATGCCTATACAAATAGCCAAACTGCAAAATCTTCAAACACTGTCTTCATTTGTTGTCAGCAGACAATCAAACGGGTTGAAGATTGGGGAGCTGAGAAAATTTCCACATCTACAAGGGAAATTGTCAATCTCAAAGTTACAAAATGTTACTGATCTCTCTGATGCCGTTCATGCCAACTTGGAGAAGAAAGAAGAAATTGATGAGTTGACATTAGAATGGGATCGTGATACAACAGAAGACTCGCAAATGGAAAGACTTGTACTTGAACAGTTGCAGCCCTCAACAAATTTGAAGAAACTCACAATCCAATTCTTTGGTGGAACCAGCTTTCCGAATTGGTTAGGAGATTCCTCATTTCGCAACATGATGTATTTGCGCATCAGTGGTTGTGATCATTGTTGGTCACTTCCTCCCCTAGGAGAGTTGCTTAGTCTCAAAGAACTCTTCATTTCTGGACTAATATCAGTGAAAATGGTAGGTACTGAGTTTTACGGAAGCATTAGTTCCCTTTCCTTTCAACCATTTCCCTCCTTGGAAATTTTGTGTTTCGAGGATATGCCAGAATGGAAGGAATGGAACATGATTGGAGGTACCACTATTGAGTTTCCTAGTCTAAGGCGTTTGTTTCTATGTGATTGTCCGAAACTCAAAGGAAACATACCACAGAACCTTCCTTCTTTAGTTGAACTCGAGTTGTCAAAATGTCCTCTGCTCAGGTCACAAGAGGTTGATAGCAGCATCAGCAGCAGCATTCGAAGGCCATCACATCCCGAGTGGATGATGATTGAACTCAATTCTCTCAAACAGTTGACTATCTCAAGCATTGTTTCTCTGAGTTCCTTCCCATTAGAACTTCTCCCTAGAACATTAAAATCTCTCACTTTCCTTTCTTGTGAGAATCTAGAATTCTTACCTCACGAATCCTCACCTATTGACACTTCACTTGAGAAATTGCAAATATTCAACAGCTGTAATTCAATGACATCCTTTTATCTAGGCTGTTTCCCTGTCCTCAAAAGTCTCTTCATCTTAGGCTGTAAAAATCTAAAATCTATTTCTGTTGCAGAAGATGATGCATCACATAGTCATTCCTTTCTTCAAAGTTTATCCATATATGCCTGTCCTAATCTTGAATCATTTCCATTTCATGGACTCACTACTCCTAACCTCAATAGTTTCATGGTGTCAAGTTGTCCTAAGCTTAAGTCACTACCTGAACCTATTCACAGTCTATCCAGCCTTTATCAATTGATTGTGTACGGACTTCCAAAACTGCAGACCTTTGCACAGGAGAGTTTACCAAGCAATTTAAGGATACTTGAAGTGTCGAATTATGGGAGTTTGTCTACTTCAGCTATCACTAAGTGGGGTTTGAAGTACCTTACTTGTCTTGCTGAGTTGCGAATTCGAGGGAAGTGGCTTCAGCATCTCACGTCTCTTGAAAACCTTGAGATTTCAGATTGTCGCCGGCTTGAATCCTTACCGGAAGAGGGACTGCCTTCCTCTCTTTCGGTACTGACTATCAAGCGATGCCTTTTACTGCAAGCAAACTGTCAGAGCAATGGAGGCAAAGAGTGGCATAAGATTTCACATATTCCATGCATAATTATTGATAACAAAGTGATAATATGA 3036 0.3923 MGGIGKTTLAKLLYNDLEVGKNFDLKAWAYISKDFDVCRVTKILLECVSSKPVVTDNLNTLQVELQQSLRKKRYLLVLDDVWDGSYDEWNKLKAVFEAGEVGSKIVITTRDESVALAMQTHIPVHYLRSLRSEDCWSLLAHHAFGPNNCKEQSKLEVIGKEIAKRCGGLPLAAEAVGGLLRTKLSEKNWNKVLKSNIWDLPNIKVLPALLLSYHYLPAPLKRCFAYCSIFPKNSGLDKKMVVLLWMAEDLVHQYKGEKTVEEVVEEYFDELVSRSLIRRQMVNAKESFMMHDLINELATTVSSAFCIRLEDPKPCESLKRARHLSYIRGNYDCFNKFNMFHESKCLRTLLALPLRHWWSSKYPNLRSHYLSSKLLFDLLPAMKRLRVLSLSHYNNITELPNSFVNLIHLRYLDLSNTKIEKLPDVICKLYNLQTLLLSKCSSLTELPEDIGNLVNLRHLDLSDTKLKVMPIQIAKLQNLQTLSSFVVSRQSNGLKIGELRKFPHLQGKLSISKLQNVTDLSDAVHANLEKKEEIDELTLEWDRDTTEDSQMERLVLEQLQPSTNLKKLTIQFFGGTSFPNWLGDSSFRNMMYLRISGCDHCWSLPPLGELLSLKELFISGLISVKMVGTEFYGSISSLSFQPFPSLEILCFEDMPEWKEWNMIGGTTIEFPSLRRLFLCDCPKLKGNIPQNLPSLVELELSKCPLLRSQEVDSSISSSIRRPSHPEWMMIELNSLKQLTISSIVSLSSFPLELLPRTLKSLTFLSCENLEFLPHESSPIDTSLEKLQIFNSCNSMTSFYLGCFPVLKSLFILGCKNLKSISVAEDDASHSHSFLQSLSIYACPNLESFPFHGLTTPNLNSFMVSSCPKLKSLPEPIHSLSSLYQLIVYGLPKLQTFAQESLPSNLRILEVSNYGSLSTSAITKWGLKYLTCLAELRIRGKWLQHLTSLENLEISDCRRLESLPEEGLPSSLSVLTIKRCLLLQANCQSNGGKEWHKISHIPCIIIDNKVII* 1012
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mtr1g1211 1011 PANTHER - 1 712 - -
Mtr1g1211 1011 Pfam NB-ARC domain 1 194 IPR002182 GO:0043531
Mtr1g1211 1011 Gene3D Ribonuclease Inhibitor 312 659 IPR032675 -
Mtr1g1211 1011 Gene3D - 129 211 IPR042197 -
Mtr1g1211 1011 PRINTS Disease resistance protein signature 68 82 - -
Mtr1g1211 1011 PRINTS Disease resistance protein signature 166 180 - -
Mtr1g1211 1011 PRINTS Disease resistance protein signature 690 706 - -
Mtr1g1211 1011 SUPERFAMILY L domain-like 731 989 - -
Mtr1g1211 1011 Gene3D - 212 300 IPR036388 -
Mtr1g1211 1011 ProSiteProfiles Leucine-rich repeat profile. 408 429 IPR001611 GO:0005515
Mtr1g1211 1011 SUPERFAMILY L domain-like 290 707 - -
Mtr1g1211 1011 Gene3D - 1 124 IPR027417 -
Mtr1g1211 1011 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 1 227 IPR027417 -
Mtr1g1211 1011 Gene3D Ribonuclease Inhibitor 687 899 IPR032675 -
Mtr1g1211 1011 Gene3D Ribonuclease Inhibitor 900 992 IPR032675 -
Mtr1g1211 1011 PANTHER DISEASE RESISTANCE PROTEIN RP 1 712 IPR044974 GO:0006952
Mtr1g1211 1011 Pfam Leucine Rich repeats (2 copies) 383 424 IPR025875 -
Mtr1g1211 1011 SMART LRR_typ_2 406 429 IPR003591 -
Mtr1g1211 1011 SMART LRR_typ_2 382 405 IPR003591 -
Mtr1g1211 1011 SMART LRR_typ_2 453 476 IPR003591 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mtr1g1211 Mtr-Chr1 14348634 14352454 Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mtr1g1211 396 492 WRKY Transcription Factor Family AT4G12020 42.857 1.18e-09 60.8
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mtr1g1211 - - mtr:MTR_0137s0070 1241.48