Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mtr1g1184 ATGGAAATTTTAATTTCTGTTGTTGCAAAAATAGCAGAATATACTGTTGTGCCTATTGGACGTCAAGCAAGTTACTTGATATTCTACAAAGGTAACTTCAAGACGTTAAAGGATCATGTTGAAGACCTTGAGGCTGCAAGAGAAAGAATGATCCATTCGGTTGAAAGAGAAAGGGGAAATGGTAGAGACATTGAAAAAGATGTTCTGAATTGGTTGGAGAAAGTGAACGAGGTCATTGAAAAGGCGAATGGGCTTCAAAACGATCCTCGTCGTCCCAATGTTAGGTGCTCAACATGGTTGTTCCCCAACTTGATTTTACGTCATCAACTAAGTAGGAAAGCCACAAAAATTGCAAAAGATGTTGTTCAAGTTCAAGGAAAAGGGATTTTTGATCAAGTTGGTTACCTTCCCCCTCCAGATGTATTACCCTCCTCCTCACCAAGAGATGGTGAAAATTATGACACAAGGGAGTCGCTTAAGGATGACATTGTGAAGGCTTTAGCAGATCTTAATTCACATAACATTGGAGTCTATGGGTTGGGTGGGGTGGGTAAGACCACTCTGGTGGAGAAAGTTGCTCTAATAGCGAAGAAAAACAAAATGTTCGATAAAGTGGTTACAACACATGTATCTGAAAACCCAGACTTTAAAACAATTCAAGGAGAGATTGCAGATTCTTTGGGTTTGCAATTCGTTGAGGAGACTGTTCTTGGCAGAGCAAATCGCCTAAGACAGAGAATCAAGATGGAGAAAAATATCCTTGTCATTTTAGATGATATTTGGAGTATACTTGATTTGAAGAAAGTGGGAATTCCATTTGGAAATAAACATAATGGTTGCAAATTGTTGATGACTAGTAGAAATCAAGATGTGTTACTAAAAATGGATGTTCCAATGGAGTTCACTTTCAAACTTGAACTTATGAATGAAAATGAGACATGGAGCTTGTTTCAATTTATGGCCGGAGATGTGGTTGAAGATAGAAATTTGAAAGATGTAGCAGTTCAAGTTGCCAAAAAATGTGAAGGTTTGCCTCTTATGGTAGTGACAGTAGCACGTGCAATGAAAAATAAGAGGGATGTCCAATCTTGGAAAGACGCACTAAGGAAATTACAAAGTACTGATCATACAGAGATGGATGCGATAACTTATTCTGCTTTGGAATTGAGTTACAACTCTTTGGAGAGTGATGAAATGAAAGATCTCTTCTTGCTTTTTGCATTACTGCTAGGTAATGATATAGAGTACTTTCTCAAAGTTGCAATGGGATTGGACATATTGAAGCATATTAATGCCATTGATGATGCAAGAAACAGACTTTACACAATAATCAAATCTTTGAAGGCGACTTGTCTTTTGCTTGAAGTTAAAACAGGTGGAAGGATTCAAATGCATGACTTTGTTCGTGATTTTGCTATCTCCATAGCACGCAGGGACAAACATGTATTTCTAAGAAAACAATTTGATGAGGAATGGACAACCAAGGATTTTTTCAAAAGGTGCACGCAGATCATTCTCGATGGGTGTTGTATTCACGAGCTTCCTCAAATGATTGATTGTCCAAACATTAAGCTTTTCTATTTGGGCAGTATGAATCAATCTTTAGAAATCCCTGATACTTTTTTTGAGGGTATGAGAAGCCTTAGAGTGCTAGATTTAACACACTTGAACTTGTCATCATTACCCACATCATTTCGGTTGCTAACAGACCTTCAAACATTATGTTTGGATTTTTGCATTTTGGAAAATATGGATGCAATAGAAGCTTTGCAAAATTTAGAAATTCTTAGACTCTGTAAATCTTCAATGATCAAGTTGCCAAGAGAAATAGGGAAATTAACTCAATTAAGAATGCTTGATTTGAGCCATTCAGGAATAGAAGTGGTCCCACCCAACATCATATCAAGTTTATCTAAATTGGAGGAGTTGTACATGGGAAATACCTCTATAAACTGGGAAGATGTGAATTCAAAAGTTCAAAATGAAAATGCTAGCATTGCCGAACTTCGAAAACTACCACACTTGACAGCTTTAGAATTACAAGTTCGTGAGACTTGGATGTTGCCAAGGGACTTGCAATTGGTGTTTGAGAAGCTGGAAAGATATAAAATAGCTATTGGAGATGTATGGGAATGGTCTGACATTGAGGATGGAACCTTAAAAACATTGATGCTCAAACTTGGTACAAACATACATTTGGAGCATGGAATTAAAGCATTGATTAAATGTGTTGAGAATTTGTATTTGGATGATGTAGATGGAATTCAAAATGTGCTTCCTAACCTAAATAGAGAAGGATTTACATTGCTGAAACATCTCCACGTCCAAAATAATACTAACTTGAATCACATTGTCGACAATAAAGAGAGAAATCAAATCCATGCGTCCTTTCCCATCTTGGAAACACTTGTACTTCTTAATCTTAGAAATTTGGAGCATATATGTCATGGTCAACCTTCAGTTGCTTCTTTTGGAAGTCTCAGTGTTATCAAAGTAAAAAATTGCGTCCAGTTAAAGTATCTTTTCTCCTTTACAATGGTTAAAGGACTTTCTCACCTTTGTAAGATTGAAGTTTGTGAGTGCAATTCTATGAAGGAGATAGTGTTCAGAGACAACAATTCAAGTGCTAATAATGATATTACTGATGAAAAAATCGAGTTTCTTCAATTGCGTTCTTTGACTTTAGAACATTTGGAGACACTTGATAATTTCTTCTCATATTATTTGACACATTCTAGAAATAAGCAAAAGTGTCATGGTTTAGAGCCGTGTGATTCTGCACCATTTTTTAATGCTCAGGTTGTATTTCCTAATTTGGATACCCTTAAATTTAGCTCACTTCTCAATTTGAATAAAGTCTGGGATGACAATCATCAATCAATGTGCAACTTGACTAGCTTGATTGTGGATAATTGTGTTGGATTGAAGTATTTATTTCCCTCTACTTTGGTTGAAAGTTTTATGAACCTCAAACACCTTGAAATAAGTAACTGTCATATGATGGAGGAGATAATAGCTAAAAAAGACAGAAACAATGCATTGAAAGAGGTTCGTTTTTTAAATTTAGAAAAAATCATATTGAAGGATATGGACAGCTTGAAGACAATATGGCATTACCAATTTGAAACATCCAAGATGTTGGAAGTGAACAATTGTAAGAAAATTGTGGTGGTTTTTCCTTCTTCAATGCAAAATACATATAATGAGCTTGAGAAGTTGGAGGTTACAAATTGTGCTTTAGTTGAAGAGATATTTGAATTGACTTTCAATGAAAATAACAGTGAAGAGGTTACAACACATTTGAAAGAAGTTACTATAGATGGATTGTGGAATCTGAAAAAGATATGGAGTGGAGATCCGGAAGAAATTCTTAGTTTTCAAAATCTAATAAATGTAAAAGTAGTAAATTGTGCAAGCTTGGAGTATTTATTACCATTCTCCATAGCCACTCGTTGCTCACATCTCAAGAAACTTGGTATAAAATGGTGTGAAAACATTAAGGAAATTGTTGCAGAGGAGAAAGAATCTAGCTTGAGTGCAGCTCCCATATTTGAGTTTAATCAACTAAGTACTTTATTGCTTTGGAACTCACCTAAACTCAATGGTTTCTATGCTGGAAATCATACTCTAGAATGTCCATCATTGAGAGAAATTAATGTCTCTAGATGTACAAAGTTGAAATTGTTCAGAACACTATCTACAAGAAGCTCCAATTTTCGAGATGACAAACCCTCTGTTTTAACGCAACCACCACTTTTCATTGCCGAAGAGGTGATTCCAAACTTGGAGCTGTTGAGGATGGTACAGGCAGATGCTGACATGATATTGCAAACTCAAAACTCAAGTGCCCTCTTTAGCAAAATGACTTCTATTGGCTTGACTAGCTATAACACTGAAGAGGCAAGATTTCCTTATTGGTTTCTTGAAAATGTGCATACTCTTGAGAAACTACATGTTGAGTGGAGTTGCTTCAAGAAGATATTTCAAGATAAAGGAGAAATAAGTGAGAAGACTCGTACACAAATCAAAACACTGATGTTGAATGAATTACCTAAACTTCAATATATATGTGATGAAGGATCTCAAATTGACCCAGTTCTTGAGTTCCTTGAATACTTAAAGGTTCGTAGTTGTTCTAGTTTGACAAATTTGATGCCTTCCTCTGTCACACTTAATCATCTGACGCAGTTGGAGATAATAAAATGCAATGGGCTAAAATATTTATTCACAACTCCTACGGCGCAAAGTTTAGACAAACTCACGGTGCTGCAGATAGAAGATTGTAGTTCACTTGAAGAAATAATTACTGGAGTAGAAAATGTTGACATTGCTTTTGTTAGTTTACAAATTTTGAATTTGGAATGTTTGCCAAGCCTCGTCAAATTTTGCTCTAGTGAGTGTTTCATGAAGTTTCCGTCATTGGAGAAAGTAATTGTTGGCGAATGTCCTCGCATGAAGATTTTTTCTGCCGGACACACAAGTACACCAATTCTTCAAAAAGTCAAAATTGCAGAAAATGATTCAGAATGGCATTGGAAGGGAAACCTAAACAATACAATATACAACATGTTCGAAGATAAGGTGGGATTTGTTAGTTTCAAGCATTTACAACTATCTGAATATCCCGAGTTAAAAGAATTGTGGTATGGTCAACACGAGCATAACACATTTAGGAGTTTGAAGTATCTAGTGGTTCATAAATGTGATTTTTTGTCCGATGTGCTCTTTCAACCTAACTTGTTAGAAGTGCTGATGAATCTGGAAGAATTAGATGTGGAGGATTGTAATTCATTAGAAGCAGTTTTTGATTTGAAAGATGAATTTGCCAAAGAAATTGTTGTGCGGAATTCTACTCAATTGAAGAAACTAAAAATATCTAATCTTCCAAAACTGAAGCATGTATGGAAAGAGGATGCATTTCCTAGTTTGGATACCCTTAAATTGAGCTCACTTCTCAATTTGAATAAAGTCTGGGATGACAATCATCAATCTATGTGCAACTTGACTAGCTTGATTGTGGATAATTGTGTTGGATTGAAGTATTTATTTCCCTCTACTTTGGTTAAAAGTTTTATGAACCTCAAACACCTTGAAATAAGTAATTGTCCTATGATGGAGGAGATAATAGCTAAAAAGGAGAGAAATAATGCATTAAAAGAGGTTCATTTATTGAAATTAGAGAAAATTATACTGAAGGATATGGACAACTTGAAGTCAATATGGCACCACCAATTTGAAACATTGAAGATGTTGGAAGTGAACAATTGTAAGAAAATTGTGGTGGTTTTTCCTTCTTCAATGCAAAACACATATAATGAGCTAGAGAAGTTGGAGGTCACAAACTGTGCTTTAGTTGAAGAGATATTCGAATTGAATTTCAATGAAAATAACAGTGAAGAGGTTATGACACAATTGAAAGAGGTTACTATAGATGGACTGTTCAAGTTGAAAAAGATATGGAGTGGAGATCCTCAAGGAATTCTTAGTTTTCAAAATCTAATATATGTACTACTAGATGGTTGTACAAGCTTGGAATATCTATTACCACTCTCCGTAGCCACTCGTTGCTCACATCTCAAGGAACTTGGTATAAAATGGTGTGAAAACATGAAGGAAATTGTTGCAGAGGAGAAAGAATCTAGCTTGAGTGCAGCTCCCATATTTGAGTTTAATCAACTAAGTACTTTATTACTTTGGCACTCACCTAAACTCAATGGTTTCTATGCTGGAAATCACACTCTGCTATGTCCATCTTTGAGGAATATTGGTGTCTCTAGATGTACAAAGTTGAAATTGTTCAGAACTCTATCCAATTTTCAAGATGACAAACACTCTGTTTCAACGAAACAACCACTTTTTATTGCCGAACAGGTGATTCCAAACTTGGAAATGTTGAGGATGCAACAGACGGATGCTGACGTGATATTGCAATCTCAAAACTCAAGTGCCCTCCTTAGCAAAATGACCATTCTTGGTTTGGCTTGCTATAACACTGAAGAGGCTACATTTCCTTATTGGTTTCTTGAAAATGTGCATACTCTTGAGAAACTACAGGTTGAGTGGAGTTGCTTCAAGAAGATATTTCAAGATAAAGGAGAAATAAGTGAGAAGACTCATACACAAATCAAAACACTGATGTTGAATGAATTACCTAAACTTCAACATATATGTGATGAAGGATCTCAAATTGACCCAGTTCTTGAGTTCCTTGAATACTTAAGGGTTCGTAGTTGTTCTAGTTTGACAAATTTGATGCCTTCCTCCGTCACCCTTAATCATCTGACGCAGTTGGAGATAATAAAATGCAATGGGCTAAAATATTTATTCACAACTCCTACTGCACGAAGTCTGGACAAGCTCACAGTGCTGAAGATAAAAGATTGTAATTCACTTGAAGAAGTAGTTAATGGAGTAGAAAATGTTGACATTGCTTTTATTAGTTTACAAATTTTGATGTTGGAATGTTTGCCAAGCCTCATCAAATTTTGCTCTAGTAAGTGTTTCATGAAGTTTCCGTTGTTGGAGAAAGTAATTGTGAGGGAATGTTCTCGTATGAAGATTTTTTCTGCTGGAGACACAAGCACACCAATTCTTCAAAAAGTCAAAATTGCAGAAAATGATTCAGAATGGCATTGGAAGGGAAACTTAAACGATACAATATACAACATGTTTGAAGATAAGGCCATAACTTCGGTTGAGGTTATCCAAACTAGGCGTAAGTATAGGCGTTGGAAAGCTAAGAAATAG 6747 0.3569 MEILISVVAKIAEYTVVPIGRQASYLIFYKGNFKTLKDHVEDLEAARERMIHSVERERGNGRDIEKDVLNWLEKVNEVIEKANGLQNDPRRPNVRCSTWLFPNLILRHQLSRKATKIAKDVVQVQGKGIFDQVGYLPPPDVLPSSSPRDGENYDTRESLKDDIVKALADLNSHNIGVYGLGGVGKTTLVEKVALIAKKNKMFDKVVTTHVSENPDFKTIQGEIADSLGLQFVEETVLGRANRLRQRIKMEKNILVILDDIWSILDLKKVGIPFGNKHNGCKLLMTSRNQDVLLKMDVPMEFTFKLELMNENETWSLFQFMAGDVVEDRNLKDVAVQVAKKCEGLPLMVVTVARAMKNKRDVQSWKDALRKLQSTDHTEMDAITYSALELSYNSLESDEMKDLFLLFALLLGNDIEYFLKVAMGLDILKHINAIDDARNRLYTIIKSLKATCLLLEVKTGGRIQMHDFVRDFAISIARRDKHVFLRKQFDEEWTTKDFFKRCTQIILDGCCIHELPQMIDCPNIKLFYLGSMNQSLEIPDTFFEGMRSLRVLDLTHLNLSSLPTSFRLLTDLQTLCLDFCILENMDAIEALQNLEILRLCKSSMIKLPREIGKLTQLRMLDLSHSGIEVVPPNIISSLSKLEELYMGNTSINWEDVNSKVQNENASIAELRKLPHLTALELQVRETWMLPRDLQLVFEKLERYKIAIGDVWEWSDIEDGTLKTLMLKLGTNIHLEHGIKALIKCVENLYLDDVDGIQNVLPNLNREGFTLLKHLHVQNNTNLNHIVDNKERNQIHASFPILETLVLLNLRNLEHICHGQPSVASFGSLSVIKVKNCVQLKYLFSFTMVKGLSHLCKIEVCECNSMKEIVFRDNNSSANNDITDEKIEFLQLRSLTLEHLETLDNFFSYYLTHSRNKQKCHGLEPCDSAPFFNAQVVFPNLDTLKFSSLLNLNKVWDDNHQSMCNLTSLIVDNCVGLKYLFPSTLVESFMNLKHLEISNCHMMEEIIAKKDRNNALKEVRFLNLEKIILKDMDSLKTIWHYQFETSKMLEVNNCKKIVVVFPSSMQNTYNELEKLEVTNCALVEEIFELTFNENNSEEVTTHLKEVTIDGLWNLKKIWSGDPEEILSFQNLINVKVVNCASLEYLLPFSIATRCSHLKKLGIKWCENIKEIVAEEKESSLSAAPIFEFNQLSTLLLWNSPKLNGFYAGNHTLECPSLREINVSRCTKLKLFRTLSTRSSNFRDDKPSVLTQPPLFIAEEVIPNLELLRMVQADADMILQTQNSSALFSKMTSIGLTSYNTEEARFPYWFLENVHTLEKLHVEWSCFKKIFQDKGEISEKTRTQIKTLMLNELPKLQYICDEGSQIDPVLEFLEYLKVRSCSSLTNLMPSSVTLNHLTQLEIIKCNGLKYLFTTPTAQSLDKLTVLQIEDCSSLEEIITGVENVDIAFVSLQILNLECLPSLVKFCSSECFMKFPSLEKVIVGECPRMKIFSAGHTSTPILQKVKIAENDSEWHWKGNLNNTIYNMFEDKVGFVSFKHLQLSEYPELKELWYGQHEHNTFRSLKYLVVHKCDFLSDVLFQPNLLEVLMNLEELDVEDCNSLEAVFDLKDEFAKEIVVRNSTQLKKLKISNLPKLKHVWKEDAFPSLDTLKLSSLLNLNKVWDDNHQSMCNLTSLIVDNCVGLKYLFPSTLVKSFMNLKHLEISNCPMMEEIIAKKERNNALKEVHLLKLEKIILKDMDNLKSIWHHQFETLKMLEVNNCKKIVVVFPSSMQNTYNELEKLEVTNCALVEEIFELNFNENNSEEVMTQLKEVTIDGLFKLKKIWSGDPQGILSFQNLIYVLLDGCTSLEYLLPLSVATRCSHLKELGIKWCENMKEIVAEEKESSLSAAPIFEFNQLSTLLLWHSPKLNGFYAGNHTLLCPSLRNIGVSRCTKLKLFRTLSNFQDDKHSVSTKQPLFIAEQVIPNLEMLRMQQTDADVILQSQNSSALLSKMTILGLACYNTEEATFPYWFLENVHTLEKLQVEWSCFKKIFQDKGEISEKTHTQIKTLMLNELPKLQHICDEGSQIDPVLEFLEYLRVRSCSSLTNLMPSSVTLNHLTQLEIIKCNGLKYLFTTPTARSLDKLTVLKIKDCNSLEEVVNGVENVDIAFISLQILMLECLPSLIKFCSSKCFMKFPLLEKVIVRECSRMKIFSAGDTSTPILQKVKIAENDSEWHWKGNLNDTIYNMFEDKAITSVEVIQTRRKYRRWKAKK* 2249
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mtr1g1184 2248 SUPERFAMILY L domain-like 936 1226 - -
Mtr1g1184 2248 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 141 405 IPR027417 -
Mtr1g1184 2248 SMART LRR_typ_2 613 636 IPR003591 -
Mtr1g1184 2248 SMART LRR_typ_2 545 567 IPR003591 -
Mtr1g1184 2248 Gene3D Ribonuclease Inhibitor 1957 2114 IPR032675 -
Mtr1g1184 2248 Gene3D Ribonuclease Inhibitor 1275 1512 IPR032675 -
Mtr1g1184 2248 Gene3D Ribonuclease Inhibitor 1762 1950 IPR032675 -
Mtr1g1184 2248 PANTHER RPP4C3 1524 1612 - -
Mtr1g1184 2248 PANTHER RPP4C3 20 1106 - -
Mtr1g1184 2248 PANTHER RPP4C3 1369 1519 - -
Mtr1g1184 2248 PANTHER RPP4C3 2070 2219 - -
Mtr1g1184 2248 PANTHER RPP4C3 1829 1933 - -
Mtr1g1184 2248 PANTHER RPP4C3 1636 1810 - -
Mtr1g1184 2248 PANTHER RPP4C3 1125 1229 - -
Mtr1g1184 2248 PANTHER - 1125 1229 - -
Mtr1g1184 2248 PANTHER - 1369 1519 - -
Mtr1g1184 2248 PANTHER - 20 1106 - -
Mtr1g1184 2248 PANTHER - 1636 1810 - -
Mtr1g1184 2248 PANTHER - 2070 2219 - -
Mtr1g1184 2248 PANTHER - 1524 1612 - -
Mtr1g1184 2248 PANTHER - 1829 1933 - -
Mtr1g1184 2248 Gene3D - 307 395 IPR042197 -
Mtr1g1184 2248 Gene3D - 140 300 IPR027417 -
Mtr1g1184 2248 SUPERFAMILY L domain-like 463 891 - -
Mtr1g1184 2248 SMART LRR_CC_2 2067 2097 IPR006553 -
Mtr1g1184 2248 SMART LRR_CC_2 1557 1583 IPR006553 -
Mtr1g1184 2248 SMART LRR_CC_2 1916 1939 IPR006553 -
Mtr1g1184 2248 SMART LRR_CC_2 1212 1235 IPR006553 -
Mtr1g1184 2248 SMART LRR_CC_2 1367 1397 IPR006553 -
Mtr1g1184 2248 Gene3D Ribonuclease Inhibitor 1513 1761 IPR032675 -
Mtr1g1184 2248 PRINTS Disease resistance protein signature 174 189 - -
Mtr1g1184 2248 PRINTS Disease resistance protein signature 247 261 - -
Mtr1g1184 2248 PRINTS Disease resistance protein signature 341 355 - -
Mtr1g1184 2248 PRINTS Disease resistance protein signature 611 627 - -
Mtr1g1184 2248 SUPERFAMILY L domain-like 1884 2207 - -
Mtr1g1184 2248 CDD AAA 156 298 - -
Mtr1g1184 2248 SMART AAA_5 171 313 IPR003593 -
Mtr1g1184 2248 SUPERFAMILY RNI-like 1366 1790 - -
Mtr1g1184 2248 Gene3D Ribonuclease Inhibitor 476 705 IPR032675 -
Mtr1g1184 2248 Pfam NB-ARC domain 157 392 IPR002182 GO:0043531
Mtr1g1184 2248 Gene3D Ribonuclease Inhibitor 1005 1247 IPR032675 -
Mtr1g1184 2248 Gene3D Ribonuclease Inhibitor 720 1004 IPR032675 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mtr1g1184 Mtr-Chr1 13823022 13836712 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mtr1g1184 175 624 WRKY Transcription Factor Family AT5G45050 24.230 1.46e-15 81.6
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mtr1g1184 - - mtr:MTR_0006s0230 4008.37