Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mtr1g1168 ATGTCTGGTGTTCCATTTCCCTCCAACCTTTTACCATCTCCTTCGAGTCCCGAATGGCTAAGCAAAGCCGACAACGCATGGCAACTAATGGCCGCAACATTAGTCGGCATGCAAAGTGTTCCGGGACTAATAATTTTATACGGTGGCGCGGTTAAAAAGAAATGGGCAGTGAATTCAGCATTCATGTCACTCTATGCATTTGCATGTGTATTTTTCTGTTGGGTTTTTTGGGCTTATAGAATGTCATTTGGTGATACACTTTTTCCATTTTGGGGTAAACCAGCACTTGCACTTGATGAAAAGTATCTTTTCAAGCAAGCTTTCTTAGGAGCATTTCCAAATGCTACTATGATTTATTTTCAATGTGTTTTTGCTGCTATTACTTTGATTTTGATAGCTGGTGCTGTGTTGGGGAGAATGAACTTCTATGCTTGGATGATGTTTGTGCCTTTATGGCTCACTTTCTCTTACACTTTTACTGCTTTTAGTATTTGGAGTACTAATGGATTTCTTGCTAAAATGGGAATTATCGATTACTCTGGTGGTTATGTCATTCATTTGTCTTCTGGGGTTGCTGGGTTTACTGCTGCTTATTGGGTTGGACCACGTCTAAACAAAGACAGGGAAAGGTTCCCACCAAACAATCTCCTTCTTATGTTAGCAGGAGCAGGACTATTATGGATGGGATGGACAGGATTCAATGGAGGAGATCCTTACTCAGTTGGCTTGGATGCTTCATTGGCTGTCTTGAACACACATGCTTGCACTGCTACTAGCTTGCTTACTTGGGTCTTCCTTGATGTCATTTTCTTCAGAAAGCCTTCTGTTATTGGTGCTGTTCAAGGCATGATTACTGGTTTGGTTTGCATTACCCCTGCTGCAGGAGTTGTACAAGGATGGGCAGCACTAATAATGGGGTTGTTCTCCGGCTCAATTCCATGGTTTACCATGATGGTAATCCACAAAAGATCAAAGCTACTTCAAAAAGTGGATGACACAATGGCAGTGTTACACACTCATGCAATTGCAGGAAGTCTTGGAGGAATTCTCACTGGTCTTTTTGCTGAGCCAAAATTGAACTCCTTGTTCTATGGTGTTTACAATAAATATGTTGGTCTATTTTATGGAATACAAATGAACATGGCTAGTACTGGACGCAGGCAAATAGGAATCCAACTCCTTGGAATTTTGTTTGTTATCTTTGTTAATGTTGTAAGTACAAGTTTGATATGTCTCTTCATTCGACTCTTCGTTCCATTGAGAATGTCTGAAGAGGATATGGAAATCGGTGACGAGGCTGCTCATGGTGAAGAAGCTTATGCAATTTGGGGTCAAGGTGATAAACATGAGAATTCAAATTCAAAATATGGAAGTTCTTTGTATGAAGATGTTGAAGTTGCGGCCACCACGAAGAATAAGCGTGGTAGCCAGATTGAGATGATGTGA 1446 0.4087 MSGVPFPSNLLPSPSSPEWLSKADNAWQLMAATLVGMQSVPGLIILYGGAVKKKWAVNSAFMSLYAFACVFFCWVFWAYRMSFGDTLFPFWGKPALALDEKYLFKQAFLGAFPNATMIYFQCVFAAITLILIAGAVLGRMNFYAWMMFVPLWLTFSYTFTAFSIWSTNGFLAKMGIIDYSGGYVIHLSSGVAGFTAAYWVGPRLNKDRERFPPNNLLLMLAGAGLLWMGWTGFNGGDPYSVGLDASLAVLNTHACTATSLLTWVFLDVIFFRKPSVIGAVQGMITGLVCITPAAGVVQGWAALIMGLFSGSIPWFTMMVIHKRSKLLQKVDDTMAVLHTHAIAGSLGGILTGLFAEPKLNSLFYGVYNKYVGLFYGIQMNMASTGRRQIGIQLLGILFVIFVNVVSTSLICLFIRLFVPLRMSEEDMEIGDEAAHGEEAYAIWGQGDKHENSNSKYGSSLYEDVEVAATTKNKRGSQIEMM* 482
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mtr1g1168 481 Pfam Ammonium Transporter Family 26 440 IPR024041 GO:0008519|GO:0016020|GO:0072488
Mtr1g1168 481 PANTHER AMMONIUM TRANSPORTER MEP2 4 481 IPR001905 GO:0008519|GO:0016020|GO:0072488
Mtr1g1168 481 PRINTS Rhesus blood group protein signature 121 137 IPR002229 GO:0005887
Mtr1g1168 481 PRINTS Rhesus blood group protein signature 217 235 IPR002229 GO:0005887
Mtr1g1168 481 PRINTS Rhesus blood group protein signature 248 270 IPR002229 GO:0005887
Mtr1g1168 481 PANTHER AMMONIUM TRANSPORTER 4 481 - -
Mtr1g1168 481 ProSitePatterns Ammonium transporters signature. 178 203 IPR018047 GO:0008519|GO:0016020|GO:0072488
Mtr1g1168 481 TIGRFAM amt: ammonium transporter 24 440 IPR001905 GO:0008519|GO:0016020|GO:0072488
Mtr1g1168 481 SUPERFAMILY Ammonium transporter 19 422 - -
Mtr1g1168 481 Gene3D Ammonium transporter AmtB like domains 12 444 IPR029020 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mtr1g1168 Mtr-Chr1 13381981 13385187 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mtr1g1168 115 467 Inorganic Solute Cotransporters AT2G38290 62.606 5.34e-144 415
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mtr1g1168 K03320 - gmx:100787856 839.336