Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mtr1g1165 ATGTCAGAGTCAAACGCCATAGCCAATGGTTTAGCTGGTGCTGGTGGTGGAATTATTGCTCAAATATTAACTTATCCACTTCAAACTGTAAACACACGCCAACAAACTGAGAGAACACTTAAGAGGAACAAGCAAAGTTCTTCTTCCAACACAATAACTACTGCTTCTTCTTCATCTTCTTCTTCTGGCATTTTTCTTCAGATTTTTCAGGTTATTGGAAATGAAGGTTGGGGTGGACTCTACAGTGGTCTTAAGCCTTCTCTTCTTGGAACTGCTGCTTCTCAGGGAATTTACTACTTCTTCTATCAAGTTTTTAAGAACAAGGCTGTGGCTATTGCAGCAGCAAGGAAAGTCAAAGGACATGGAGACGGTACTGTTGGAATGTTCGGTTGGCTCATTGTTGCTGCTATTGCCGGGTCATTGAATGTTTTGTTCACAAATCCAATATGGGTTCTCGTGACTCGAATGCAGACACATACTCAAGCAGAAAGAAAAATCTTGGAGGAAAAGAAAGAAGCTTTAAGGAAGGCTGCCTCTGAGAGTAGCTTAGCAGGTTCAACTTTGGAAGAAAAGTTGGAAAAACTGAATTCTACAAAGCCTAAACCATTTGGGACTATACATGCAGCTAATGAAGTATACAACGAAGCCGGTATAGTTGGGTTTTGGAAAGGTGTCATCCCTGCACTAATTATGGTATGCAATCCATCGATACAGTTTATGATTTACGAGAGTTCATTAAAGCATCTAAGGGCAAAGCGCTCTGCCAAGAAGCAAGGGGATACGAGTGTAACTGCTTTAGAGGTCTTTTTGGTCGGAGCAATAGCGAAACTTGGAGCTACTGTCACAACATACCCGTTACTAGTTGTCAAGTCAAGGCTTCAAGCAAAACAGGAGATTGGTGGAAATAACTCATTAAGATACTCAGGTACATTTGATGCAATTCTCAAAATGATCCGTTATGAAGGATTCCCAGGCTTTTATAAAGGGATGAGCACAAAGATAGTACAGAGTGTTTTTGCTGCTTCTGTATTATTCATGGTAAAGGAGGAGCTTGTTAAGGCTATCACAGTTATAGCAAATAAGAGCAAAAAAGTTGTATTAAATTCGAGTAGTTAA 1116 0.4014 MSESNAIANGLAGAGGGIIAQILTYPLQTVNTRQQTERTLKRNKQSSSSNTITTASSSSSSSGIFLQIFQVIGNEGWGGLYSGLKPSLLGTAASQGIYYFFYQVFKNKAVAIAAARKVKGHGDGTVGMFGWLIVAAIAGSLNVLFTNPIWVLVTRMQTHTQAERKILEEKKEALRKAASESSLAGSTLEEKLEKLNSTKPKPFGTIHAANEVYNEAGIVGFWKGVIPALIMVCNPSIQFMIYESSLKHLRAKRSAKKQGDTSVTALEVFLVGAIAKLGATVTTYPLLVVKSRLQAKQEIGGNNSLRYSGTFDAILKMIRYEGFPGFYKGMSTKIVQSVFAASVLFMVKEELVKAITVIANKSKKVVLNSSS* 372
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mtr1g1165 371 Pfam Mitochondrial carrier protein 4 107 IPR018108 -
Mtr1g1165 371 Pfam Mitochondrial carrier protein 126 250 IPR018108 -
Mtr1g1165 371 Pfam Mitochondrial carrier protein 263 354 IPR018108 -
Mtr1g1165 371 ProSiteProfiles Solute carrier (Solcar) repeat profile. 263 354 IPR018108 -
Mtr1g1165 371 SUPERFAMILY Mitochondrial carrier 5 350 IPR023395 -
Mtr1g1165 371 PANTHER MITOCHONDRIAL NICOTINAMIDE ADENINE DINUCLEOTIDE TRANSPORTER 1-RELATED-RELATED 4 364 IPR044712 GO:0006862|GO:0055085
Mtr1g1165 371 ProSiteProfiles Solute carrier (Solcar) repeat profile. 126 248 IPR018108 -
Mtr1g1165 371 PANTHER PEROXISOMAL NICOTINAMIDE ADENINE DINUCLEOTIDE CARRIER 4 364 - -
Mtr1g1165 371 Coils Coil 157 177 - -
Mtr1g1165 371 ProSiteProfiles Solute carrier (Solcar) repeat profile. 4 108 IPR018108 -
Mtr1g1165 371 MobiDBLite consensus disorder prediction 38 58 - -
Mtr1g1165 371 Gene3D Mitochondrial carrier domain 11 366 IPR023395 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mtr1g1165 Mtr-Chr1 13309905 13315438 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mtr1g1165 70 355 Chloroplast and Mitochondria Gene Families AT2G47490 30.375 4.20e-27 107
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mtr1g1165 K13354 - gmx:100777898 577.015