Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mtr1g1164 ATGCACTTTTGTCCAAGTACAATGACCTTGTTTAAGTATATTGCACCATTTGTAGCCATTCTTTTCATAATATTCTACAATATATGGAGACGAAACAAAAATGAACTTGTACCAAATTGGCCAATAATTGGTATGCTACCATCAATTTTACAAAATATATCCAATATTCATGATTTTGTTACCTTAGGTTCCAAACATTATGGAGGTACTTTTCATTTTAAAGGACCTTGGTTCACAAACATTGCCAACTTTACCCTCACATGTGATCCCATGAATGTGCATCACATTACCAGCAAAAATTTCAGCAATTATGGGAAAGGATCTGATTTCCCTGAAATTTGTGACGTTCTTGGTGTTAGTATTGTAAATCTGGATTCCAATGAATGGAAGCAAGAAAGGACTATTCTTCATTCATTGCTTAAAGCAAAAACTTTTGAGACATCCCTTCGACAAAACATTCAAAAGAAACTAGAAAGTTGTCTATTACCATTTCTTGATCATGCATCAAAAGGTGTACACGTACTTGATTTACAAGATATTATTGAGAGGTTCACCTTTGATATTACTTGTAATTTTTTATTTGGATTTGATCCTAATTGTCTTCCTTACAAGTTCAATGAGCTTCGAGAAATTGCTTATGTAAAAGCTATTTCTGTGATTGAGGATACATTATTGCATAGGCACTCTGTTCCAAAATGTGTTTGGAAGCTACAGAAATGGCTACATATTGGTCAAGAGAAGAAGAACAGTATAGCTCAAAAAAATATTCATCAATTCTTGTTCAAAATGATAATGCATTCGAAATATGATGAAAATAAAAGTAGATTAAAAACCAGTGAAGATGTTGCTGAAATTCATCCTGTTGGTGTGTTAAAACCACTAATGAAGGAAGGCTTGGGAAAGGAAGAAACGAATGAAAATGAAAAGTATATTAGAGACACTGCATTCACTCTCTTGGCTGCAGGAAATGGAACAGTTAGTTCAGGTCTAAGTTGGTTCTTTTGGCTTGTTTCAACTCATCCTAATGTGGAAGCAAAACTTATTCAAGAGATCAAAGATCATTGTCTAACACAAGAGGAGAATTTGATCAATAATTTAAATGTTGAAAACATTGATAAGCTGATTTACCTTCATGCAGCTATATGTGAAACCTTGAGACTTTATCCTCCTATACCATTTGATCACAAGTGTGCAGTTAATTCTGATATACTACCTAGTGGACACCATGTTGGTCCAAACACAAAGTTAATATACTCTTTGTATGCAATGGGAAGAATGGAACATGTATGGGGTGGTGATTGCTTGGAGTTTAAGCCTGAGAGATGGATATCAGATAAAGGACAAATTATACATGTACCATCTTACAAGTTCATAGCATTCAATGCAGGTCCTAGAAGCTGTCTTGGGAAAGATATTAGCTTTATTCAAATGAAAATGGTTGCAGCTTCTGTATTATGGAAGTTTCACATACATGTGGTGGAAGGTCAGTCTGTTACTCCTAGGGTTTCGATTGTTCTTCGTGTGGAAGGCCTTAAGGTTAATGTAAGTAAAAGGTTCATTTGA 1563 0.3455 MHFCPSTMTLFKYIAPFVAILFIIFYNIWRRNKNELVPNWPIIGMLPSILQNISNIHDFVTLGSKHYGGTFHFKGPWFTNIANFTLTCDPMNVHHITSKNFSNYGKGSDFPEICDVLGVSIVNLDSNEWKQERTILHSLLKAKTFETSLRQNIQKKLESCLLPFLDHASKGVHVLDLQDIIERFTFDITCNFLFGFDPNCLPYKFNELREIAYVKAISVIEDTLLHRHSVPKCVWKLQKWLHIGQEKKNSIAQKNIHQFLFKMIMHSKYDENKSRLKTSEDVAEIHPVGVLKPLMKEGLGKEETNENEKYIRDTAFTLLAAGNGTVSSGLSWFFWLVSTHPNVEAKLIQEIKDHCLTQEENLINNLNVENIDKLIYLHAAICETLRLYPPIPFDHKCAVNSDILPSGHHVGPNTKLIYSLYAMGRMEHVWGGDCLEFKPERWISDKGQIIHVPSYKFIAFNAGPRSCLGKDISFIQMKMVAASVLWKFHIHVVEGQSVTPRVSIVLRVEGLKVNVSKRFI* 521
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mtr1g1164 520 SUPERFAMILY Cytochrome P450 37 518 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Mtr1g1164 520 PRINTS P450 superfamily signature 321 338 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Mtr1g1164 520 PRINTS P450 superfamily signature 379 390 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Mtr1g1164 520 PRINTS P450 superfamily signature 458 467 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Mtr1g1164 520 PRINTS P450 superfamily signature 467 478 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Mtr1g1164 520 PANTHER CYTOCHROME P450 19 515 - -
Mtr1g1164 520 ProSitePatterns Cytochrome P450 cysteine heme-iron ligand signature. 460 469 IPR017972 GO:0005506|GO:0016705
Mtr1g1164 520 PRINTS E-class P450 group I signature 310 327 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Mtr1g1164 520 PRINTS E-class P450 group I signature 330 356 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Mtr1g1164 520 PRINTS E-class P450 group I signature 378 396 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Mtr1g1164 520 PRINTS E-class P450 group I signature 457 467 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Mtr1g1164 520 PRINTS E-class P450 group I signature 467 490 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Mtr1g1164 520 PANTHER CYTOCHROME P450 FAMILY PROTEIN 19 515 - -
Mtr1g1164 520 Pfam Cytochrome P450 38 507 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Mtr1g1164 520 Gene3D Cytochrome P450 30 519 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mtr1g1164 Mtr-Chr1 13306193 13308374 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mtr1g1164 8 518 Cytochrome P450 AT2G23180 40.115 1.18e-135 401
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mtr1g1164 - - cam:101494575 664.07