Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mtr1g1163 ATGTTTGAGTATACTACATTTTTTTTAGCAATTCTCTTCATCATATTTTACAATATATGGAGACACAACAAAAATAAAATTATACCAAACTGGCCAATCATTGGCATGGTACCATCTGTTTTGCATAACCAATCCAAAATTCATGATTTTGTAACCTTAGCTTTGAAACATCATAGAGGTACTTTTCAGTTTAAAGGACCTTGGTTCACAAATATTGCCACATTTATCATCACTAGTGATCCCATGAATGTGAACCACATCCTCAGCAAAAAATTCAGTAACTATGGGAAAGGATCTGATTTCCTTGAGATTTTTGAAATTCTCGGTGTTGGTATTTTCAATTTGGATTCCAAGGAATGGGAACAAGAAAGGGCACTACTTCATTCATTGCTCAAAACCAAAAACTTTGAGATATTCTATCAACAAAACATTCAAAAGAAACTAGAGAATTGCCTATTACCATTTCTTGATCATGCATCCAAAGAAGTAAAAGTACTTGATTTACAAGATGTTCTTGAGAGGTTTACCTTTGATATTTCTTGCACTTTTTTTTTTGGATTCGATCCTAATTGCCTTCCTTACAAGTGCAATGAGTTATCAGATATTGCTTATGAAAAAGCTTTTAGTGTACTTGAGGATATGGTATTGCGTAGACACTATATTCCGAAATGTATTTGGAAGCTACAAAAGTGGCTACAAATTGGTCTAGAGAAGAAGGGCAAGGCAGCTAGAGAAAATCTTCACCAATTCTTGGAGAAATGTATAACTGATTACAAAGGAAATGAAGATGTAGATGAATCTCGTTATTGCCTGCTAAAAGAACTAATGAAGGAAAGATTGGGAAAGGGGGAAATGATCGATGAGAAGTATATCAGAGACACTGCGGTAAATCTCTTCGGTGCAGGAAATGGAACAATTAGTTCAGGTCTAAGTTGGTTCTTTTGGCTTGTTTCAACTCATCCTATTGGGGAAGCGAAAATTATTCAAGAGATCAAAGATAATTGTCTAACACAAGAGGAGAATTTAATCAATAATTTAAACGTGGAAAAGATTGATAAGCTTGTTTACCTTCATGGAGCCATATGTGAAACCTTGAGGCTATATCCTCCTCTGGCATTTCAGCACAAGTGCGCTATCAAATCTGATATACTACCTAGTGGAGAACATGTTGGTCCAAATACAAAGTTGATATATTCTTTGTATGCAATGGGAAGGATGCAACAAATATGGGGAGATGATTGCTTGGAATTTAAGCCTGAAAGATGGATATCAGCTAGAGGAGGGATTATAAATGTACCGTCTTACAAGTTCATAGCTTTCAATGCAGGTCCTAGAAGTTGTATTGGGAAAGATCTTAGCTTCGTTCAAATGAAAATGGTTGCAGCTTCTTTGTTATGGAAGTTTCGCATACAGGTGGTGGAAGGTCACCCTGTAACGCTGAGAACTTCTATTGTCGTTCGCATGAAACACGGCTTAAAGGTCGAAGTCAGTAAAAGATGCATTTGA 1506 0.3606 MFEYTTFFLAILFIIFYNIWRHNKNKIIPNWPIIGMVPSVLHNQSKIHDFVTLALKHHRGTFQFKGPWFTNIATFIITSDPMNVNHILSKKFSNYGKGSDFLEIFEILGVGIFNLDSKEWEQERALLHSLLKTKNFEIFYQQNIQKKLENCLLPFLDHASKEVKVLDLQDVLERFTFDISCTFFFGFDPNCLPYKCNELSDIAYEKAFSVLEDMVLRRHYIPKCIWKLQKWLQIGLEKKGKAARENLHQFLEKCITDYKGNEDVDESRYCLLKELMKERLGKGEMIDEKYIRDTAVNLFGAGNGTISSGLSWFFWLVSTHPIGEAKIIQEIKDNCLTQEENLINNLNVEKIDKLVYLHGAICETLRLYPPLAFQHKCAIKSDILPSGEHVGPNTKLIYSLYAMGRMQQIWGDDCLEFKPERWISARGGIINVPSYKFIAFNAGPRSCIGKDLSFVQMKMVAASLLWKFRIQVVEGHPVTLRTSIVVRMKHGLKVEVSKRCI* 502
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mtr1g1163 501 Pfam Cytochrome P450 29 493 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Mtr1g1163 501 PRINTS P450 superfamily signature 301 318 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Mtr1g1163 501 PRINTS P450 superfamily signature 359 370 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Mtr1g1163 501 PRINTS P450 superfamily signature 438 447 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Mtr1g1163 501 PRINTS P450 superfamily signature 447 458 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Mtr1g1163 501 Gene3D Cytochrome P450 13 500 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Mtr1g1163 501 PRINTS E-class P450 group I signature 290 307 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Mtr1g1163 501 PRINTS E-class P450 group I signature 310 336 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Mtr1g1163 501 PRINTS E-class P450 group I signature 437 447 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Mtr1g1163 501 PRINTS E-class P450 group I signature 447 470 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Mtr1g1163 501 PANTHER CYTOCHROME P450 12 496 - -
Mtr1g1163 501 SUPERFAMILY Cytochrome P450 17 499 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Mtr1g1163 501 PANTHER CYTOCHROME P450 FAMILY PROTEIN 12 496 - -
Mtr1g1163 501 ProSitePatterns Cytochrome P450 cysteine heme-iron ligand signature. 440 449 IPR017972 GO:0005506|GO:0016705
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mtr1g1163 Mtr-Chr1 13278432 13280099 Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mtr1g1163 16 499 Cytochrome P450 AT2G23180 41.734 3.47e-142 417
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mtr1g1163 - - cam:101494575 699.123