Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mtr1g1161 ATGTCAATAATTCAGTGTATTGGAGGATTACTAGCCATTCTAATCTTCCTATACATCTACTACTGGAGACGCAATAGATATGGAAGTTTACCAATTAATTTGCCAATAATTGGTATGCTACCGTCGCTTTTGCGTCACTTATTCAAATTCCATGATTATCTAACCTTAATTTTGAAACGTAATGGAGGAACATTTCGATTTGAAGGAGCCTGGTTCACAAACACAAGCTTTATCGTTACAAGTGATCCATTGAATGTTGACCACATTGCAGGCAAGAATTTTGGCAACTACGGAAGGGGGTCCAACTTCAAAGAAATTTTTGATTTTTTTGGAGATGGTATTTTAAATTCTAATTCCAACGTATGGAAACAACAGAGGACAATGTTTCATTCATTTCTCAAAAGGAAAACCTTCAAGAACTTCTTCCAACAAACTATGAAGAAAAAGCTGGAGAACTACCTACTACCATTTCTTGATGATGTATCTGAAATAGGTGCTCAGCTGGACCTGGAGGATGCCTTGAGTAGGTTCACTTTTGATAGCATCTGCACTATTGCATTTGGATTTGATCCTAATTGCCTTCCAAACAAGTTTAATGAGCTAACAGAAATTGCTTATCAAAAAGCTCTTACAGTGATAGATGAGGTGATAATGTACCGGCACTTCATTCCAAGTTTTCTATGGAAGCTACAAAAATGGCTCCATGTTGGTCAAGAAAAGAAGTTAAGGGAAGCCGAAGAAAATCTTGACCGATTCTTATATGAAAGTATAACATTTTCCAAACAAGAGCAAAGGAAGTACAACGGTAGTGAAGAAATGGACGAATGTTATTTTGTCCGGGAAAAAGCTCGGACGAAGGAAGGATATGGAAAGGAAGAAATGAGTGGGAAGTTTCTTAGAGACGATACACTCTCTCTCTTCTTAGCAGGAAGTGGTCCAGCTAGTTCAGGTCTAAGTTGGTTTTTTTGGCTTGTTTCCACTCATCCTATTGTGGAAGCCAAAATAATTCAAGAAATCAAAGATAACTGTCCTACACAAGAGGAGAATCAGATTCCTTCGAGAGATGAGTATCTTGATAAGCTAGTGTACCTTCATGGAGCTATATGTGAAGCCTTGAGACTTTATCCTCCTGTACCTTTTGAGCATATATGTGCAATCAAATCCGATATACTACCTAGTGGAGAGCGTGTTAGTCCAAATACAAGGTTATTGTACTCTTTGTACGCTATGGGAAGGATGGAACAAATATGGGGAGAAGACTGCATGGAATTTAAGCCTGAGAGATGGGTATCAGAGACAGGACACATTATACATGTACCATCTTACAAGTTCATAGCTTTCAATACAGGTCCTAGAAGTTGTTTGGGTAAAGATCTTAGTTTCATTCAAATGAAGATGGTCGCAGCTGCTTTGTTACAGAATTTTCACATAAAGATAGTGGAAGGTCACCCTGTAACCCCAAAGATTTCTTTTGTTCTTCACATGAAATATGGTTTAAAGGTTAAAGTCACTAAAAGATGCATTTGA 1527 0.3779 MSIIQCIGGLLAILIFLYIYYWRRNRYGSLPINLPIIGMLPSLLRHLFKFHDYLTLILKRNGGTFRFEGAWFTNTSFIVTSDPLNVDHIAGKNFGNYGRGSNFKEIFDFFGDGILNSNSNVWKQQRTMFHSFLKRKTFKNFFQQTMKKKLENYLLPFLDDVSEIGAQLDLEDALSRFTFDSICTIAFGFDPNCLPNKFNELTEIAYQKALTVIDEVIMYRHFIPSFLWKLQKWLHVGQEKKLREAEENLDRFLYESITFSKQEQRKYNGSEEMDECYFVREKARTKEGYGKEEMSGKFLRDDTLSLFLAGSGPASSGLSWFFWLVSTHPIVEAKIIQEIKDNCPTQEENQIPSRDEYLDKLVYLHGAICEALRLYPPVPFEHICAIKSDILPSGERVSPNTRLLYSLYAMGRMEQIWGEDCMEFKPERWVSETGHIIHVPSYKFIAFNTGPRSCLGKDLSFIQMKMVAAALLQNFHIKIVEGHPVTPKISFVLHMKYGLKVKVTKRCI* 509
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mtr1g1161 508 PANTHER CYTOCHROME P450 16 503 - -
Mtr1g1161 508 PANTHER CYTOCHROME P450 FAMILY PROTEIN 16 503 - -
Mtr1g1161 508 ProSitePatterns Cytochrome P450 cysteine heme-iron ligand signature. 447 456 IPR017972 GO:0005506|GO:0016705
Mtr1g1161 508 PRINTS E-class P450 group I signature 298 315 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Mtr1g1161 508 PRINTS E-class P450 group I signature 318 344 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Mtr1g1161 508 PRINTS E-class P450 group I signature 444 454 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Mtr1g1161 508 PRINTS E-class P450 group I signature 454 477 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Mtr1g1161 508 Pfam Cytochrome P450 31 496 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Mtr1g1161 508 SUPERFAMILY Cytochrome P450 18 506 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Mtr1g1161 508 Gene3D Cytochrome P450 17 507 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Mtr1g1161 508 PRINTS P450 superfamily signature 309 326 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Mtr1g1161 508 PRINTS P450 superfamily signature 366 377 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Mtr1g1161 508 PRINTS P450 superfamily signature 445 454 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Mtr1g1161 508 PRINTS P450 superfamily signature 454 465 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mtr1g1161 Mtr-Chr1 13237607 13239148 Dispersed/Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mtr1g1161 2 507 Cytochrome P450 AT4G39500 43.798 1.50e-150 439
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mtr1g1161 - - mtr:MTR_1g035760 824.698