Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mtr1g1159 ATGCAATTTGAAAACACACACTTTAGTAAATCTATAATGTCAATAATTCAGTGTATTGGAGGATTTGTAGCCATCCTAATCTTCCTATACATTTACTATTGGAGACGCAATAGAGATGAATTTGTACCAATTAATTGGCCAATAATTGGTATGCTACCAACATTTTTGCATCATCTCTCCGATTTCCATGATTATGCAACCATTGTTTTGAAGCGTAATGGAGGAACTTATCGATTTCAAGGACCCTGGTTCACAAACACAAGCTTTGTCGGTCTAGCTGATCCAATGAACGTGACATACATCACAAAGAAGAATTTTGGCAACTACGCGAAAGGGTCAAAATTCCATGATATTTTTGAAGTTCTTGGAGGTAGTATTTTCAATTCTGATTCCAACGATGTATGGAAACAGGAGAAGACAATGTTTCATTTAGTTCTTGGAAGGAAAAGCTTCAAGAACATGTTCCAACATTCCATTCAGAAGAAGGTGGACGACTATCTAATACCATTTCTTAATGATGTATCTGAAGCAGGAGCTCAGGTGGATTTGCAAGATGCCTTTAATAGGTTCACCTTTGATAGCAGCTGCCTGATTTTATTTGGATTTGATCCAAATTGCCTTCCAAACAAGTTTAATCAGCTTAGAGAAATTCCTTATAAAAAATCTCTTCCTGTGATGGAGGAAGTGATATTTTACAGGCACTTCATTCCAAGTAGTTTATGGAAGTTGCAAAAATGGCTCAATGTTGGTCAAGAGAAGAAGTTCAAGGTTGCCCAAGAATATCTTGACCGATTCTTGTATGAAAGTATAACATTTTCCCTTGGTGAAGAGCAAAGCAAATGCAGCAACGAAGAAATGGACCAATGTTTTTTAGGCATGGTAAAAGCCCTAAAGAAAGAAGGATATGGAAAGGGGGAAATCAGTGAGAAGTATCTTAGAGATACTGCACTCACTATGGTGTTTGCCGGAAATGGTTCAATTAGTTCAGCTCTCAGTTGGTTTTTCTGGCTCCTTTCAACTTATCCTATTGTGGAAGAAAAAATCATTCAAGAGATCAAAGATAATTGGCTAACACAAGAGGATAATCGGATTATTTTGAGGGATGTGGTTCTTGATAAGCTAGTATACCTCCATGGAGCTATATGTGAAACCTTAAGGCTTTATCCACCTATACCTTTTGAGCATATCTGTGCAATCAAATCCGATATACTACCTAGTGGAGAACGTATTAGTCCAAATACAAGTTTAATGTACTCTATGTATTCTATGGGCAGGATGGAACAACTATGGGGGGAAGACTGCATGGAATTTAAGCCTGAGAGATGGATATCTGAGAGGGGAGATATTATACATGTACCTTCTTACAAGTTCATAACTTTCAACACAGGACCCAGAATTTGTATAGGTAAAGATCTTAGTTTCATTCAAATGAAGATGGTCGCAGCTGCTTTGTTACGGAAGTTTCACATACAGGTGGTGGAAGGTCACCTTGTAACCCCAAGGCTTTCTGTGTTTCTTCGCATGAAACATGGCTTGAAGGTTGAAGTCTCTAAAAGAAGCATTTGA 1566 0.378 MQFENTHFSKSIMSIIQCIGGFVAILIFLYIYYWRRNRDEFVPINWPIIGMLPTFLHHLSDFHDYATIVLKRNGGTYRFQGPWFTNTSFVGLADPMNVTYITKKNFGNYAKGSKFHDIFEVLGGSIFNSDSNDVWKQEKTMFHLVLGRKSFKNMFQHSIQKKVDDYLIPFLNDVSEAGAQVDLQDAFNRFTFDSSCLILFGFDPNCLPNKFNQLREIPYKKSLPVMEEVIFYRHFIPSSLWKLQKWLNVGQEKKFKVAQEYLDRFLYESITFSLGEEQSKCSNEEMDQCFLGMVKALKKEGYGKGEISEKYLRDTALTMVFAGNGSISSALSWFFWLLSTYPIVEEKIIQEIKDNWLTQEDNRIILRDVVLDKLVYLHGAICETLRLYPPIPFEHICAIKSDILPSGERISPNTSLMYSMYSMGRMEQLWGEDCMEFKPERWISERGDIIHVPSYKFITFNTGPRICIGKDLSFIQMKMVAAALLRKFHIQVVEGHLVTPRLSVFLRMKHGLKVEVSKRSI* 522
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mtr1g1159 521 ProSitePatterns Cytochrome P450 cysteine heme-iron ligand signature. 460 469 IPR017972 GO:0005506|GO:0016705
Mtr1g1159 521 SUPERFAMILY Cytochrome P450 43 519 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Mtr1g1159 521 PANTHER CYTOCHROME P450 25 516 - -
Mtr1g1159 521 Pfam Cytochrome P450 43 514 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Mtr1g1159 521 PANTHER CYTOCHROME P450 FAMILY PROTEIN 25 516 - -
Mtr1g1159 521 PRINTS P450 superfamily signature 322 339 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Mtr1g1159 521 PRINTS P450 superfamily signature 379 390 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Mtr1g1159 521 PRINTS P450 superfamily signature 458 467 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Mtr1g1159 521 PRINTS P450 superfamily signature 467 478 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Mtr1g1159 521 Gene3D Cytochrome P450 37 520 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Mtr1g1159 521 PRINTS E-class P450 group IV signature 313 339 IPR002403 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Mtr1g1159 521 PRINTS E-class P450 group IV signature 374 390 IPR002403 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Mtr1g1159 521 PRINTS E-class P450 group IV signature 425 443 IPR002403 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Mtr1g1159 521 PRINTS E-class P450 group IV signature 467 485 IPR002403 GO:0004497|GO:0005506|GO:0016705|GO:0020037
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mtr1g1159 Mtr-Chr1 13194265 13196039 Dispersed/Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mtr1g1159 13 520 Cytochrome P450 AT2G23180 40.154 1.31e-138 409
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mtr1g1159 - - mtr:MTR_1g035760 723.776