Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mtr1g1157 ATGTCAATAATTCAGTGTATTGGAGGATTTGTAACCATCCTAATCTTCCTATACATCTACTATTCGAGACGCAATAGAGATGAACTTTTACTAATTAATTGGCCAATAATTGGTATACTACCGTCATTTTTGTGTCATCTCTCCGATTACCATGATTATTCAACCATTGTTTTGAAGCGTTATGGAGGAACTTGTCGATTTCAAGGGCCCTGGTTCACAAACACAAGCTTTATCGCTCTAGCTGATCAAATGAACGTGAACTACATCACAAAGAAGAATTGTGGCAACTACAGGAAAGGGTCAAAATATCATGACATTTTTGAAGTTCTTGGAGGTAGTATTTTCAATTCTGATTCCGACGATGTATGGAAACAAGAGAAGACAATGTTTCATTTAGTTCTTGGAAGGAAAAGCTTCAAGAACATGTTCGAACAATCCATTCAGAAGAAGGTGGAGAACTACCTGATACCATTTCTTAATGATGTATCTGAAGCAGGAGCTCATGTGGATTTGCAAGATGCCTTTAATAGGTTCACCTTTGATAGCAGCTGCATGATTTTATTCGGATTTGATCCAAATTGCCTTCCAAACAAGTTTAATCAGCTTAGAAAAATTCCGTATAAAGAATCTCTTCCTGTGATGGAGGAAGTGATATTATACAGGCACTTCATTCCAAGTAGTTTATGGAAGTTGCAAAAATGGCTCAATGTTGGTCAAGAGAAGAAGTTCAAGGTTGCCCAAGAATATCTTGACCGATTCTTGTATGAAAGTATAACATTTTCCCATGGTGAAGAGCAAAGCAAGTGCAGCGATGAAGAAATGGACCAATGTTTTTTAGGCATGGTAAAAGCCCTAAAGAAAGAAGGACATGGAAAGGGAGAAATCAGTGAGAAGTATCTTAGAGACACTGCATTTACTATGATATTTGCCGGAAATGGTACAATTAGTTCAGCTCTCAGTTGGTTTTTCTGGCTTCTTTCAACTTATCCTATTGTGGAAGAAAAAATCATTCAAGAGATCAAAGATAATTGGTTAACACAAGAGGGTAATCGGATTACTTTGAGGCATGTGGATCTTGATAAGCTAGTATACCTCCATGGAGCTATATGTGAAACCTTAAGGCTTTATCCTCCTATACCTTTTGAGCATATCTGTTCAATCAAATCTGATATACTACCTAGTGGATACCATGTTAGTCCAAATACAACTTTGATTTACTCTTTGTATTCTATGGGAAGGATGGAACAAATATGGGGAGAAGACTGCATGGAATTTAAGCCTGAGAGATGGATATCTGAGAGGGGAGATATTATACATGTACCATCTTACAAGTTCGTAGCTTTCAACACAGGACCCAGAATTTGTATAGGTAAAGATCTTAGTTTCATTCAAATGAAGATGGTCGCAGCTGCTTTGTTACAGAAGTTTCACATACAGGTGGTGGAAGGTCACCCTGTAACCCCAAGGCTTTCTGTGCTTCTTCGCATGAAACATGGCTTGAAGGTTGAAGTCTCTAAAAGAAGCATTTGA 1530 0.3778 MSIIQCIGGFVTILIFLYIYYSRRNRDELLLINWPIIGILPSFLCHLSDYHDYSTIVLKRYGGTCRFQGPWFTNTSFIALADQMNVNYITKKNCGNYRKGSKYHDIFEVLGGSIFNSDSDDVWKQEKTMFHLVLGRKSFKNMFEQSIQKKVENYLIPFLNDVSEAGAHVDLQDAFNRFTFDSSCMILFGFDPNCLPNKFNQLRKIPYKESLPVMEEVILYRHFIPSSLWKLQKWLNVGQEKKFKVAQEYLDRFLYESITFSHGEEQSKCSDEEMDQCFLGMVKALKKEGHGKGEISEKYLRDTAFTMIFAGNGTISSALSWFFWLLSTYPIVEEKIIQEIKDNWLTQEGNRITLRHVDLDKLVYLHGAICETLRLYPPIPFEHICSIKSDILPSGYHVSPNTTLIYSLYSMGRMEQIWGEDCMEFKPERWISERGDIIHVPSYKFVAFNTGPRICIGKDLSFIQMKMVAAALLQKFHIQVVEGHPVTPRLSVLLRMKHGLKVEVSKRSI* 510
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mtr1g1157 509 Gene3D Cytochrome P450 31 508 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Mtr1g1157 509 PRINTS P450 superfamily signature 310 327 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Mtr1g1157 509 PRINTS P450 superfamily signature 367 378 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Mtr1g1157 509 PRINTS P450 superfamily signature 446 455 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Mtr1g1157 509 PRINTS P450 superfamily signature 455 466 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Mtr1g1157 509 PANTHER CYTOCHROME P450 FAMILY PROTEIN 13 504 - -
Mtr1g1157 509 PANTHER CYTOCHROME P450 13 504 - -
Mtr1g1157 509 SUPERFAMILY Cytochrome P450 18 507 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Mtr1g1157 509 ProSitePatterns Cytochrome P450 cysteine heme-iron ligand signature. 448 457 IPR017972 GO:0005506|GO:0016705
Mtr1g1157 509 PRINTS E-class P450 group I signature 299 316 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Mtr1g1157 509 PRINTS E-class P450 group I signature 319 345 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Mtr1g1157 509 PRINTS E-class P450 group I signature 445 455 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Mtr1g1157 509 PRINTS E-class P450 group I signature 455 478 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Mtr1g1157 509 Pfam Cytochrome P450 33 501 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mtr1g1157 Mtr-Chr1 13164463 13166121 Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mtr1g1157 1 508 Cytochrome P450 AT2G23180 39.458 2.85e-136 402
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mtr1g1157 - - mtr:MTR_1g035760 702.975