Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mtr1g1149 ATGCATCATAGACACAAGCAATTCAAAACATATTTTAGTAAATCGAAAATGTGCACTATTCAGTGTGTTGGAGGATTGGCAGCCATCCTAATCTTCTTATACATCCACTATTGGAGACGCAATAGAGATGAATTTGTACCAATTAATTGGCCAATATTTGGTATGCTACTGGCGCTTATGTGTAACCTGTCCAATTTCCATGATCGTGCAACCTTAATTTTGAAACATCATGGAGGAACGTTTAGATTTGGAGGAGCCTGGTTCACAAACACAAGCTTTATTGGTACCAGTGATCCAATGAATGTTGAACACATTGCGAGCAAGAATTTTGGCAACTACGGAAGGGGGTCCAACTTCAAAGAAATTTTTGATTTTTTTGGAGATGGTATTTTAAATTCTAATTCCCACGTATGGAAACAACAGAGGACAATGTTTCATTCATTTCTTAAAAGGAAAACCTTCAAGAACTTCTTCCAACAAACTATGAAGAAAAAGCTGGAGAACTACCTACTACCATTTCTTAATGATGTATCTGAAATAGGTGCTCAGGTGGACCTGGAGGATGCCTTGAGTAGGTTCACTTTTGATAGCATCTGCACTATTGCATTTGGATTTGATCCTAATTGCCTTCTAAACAAGTTTAATGAGCTAACAGAAATTGATTATCAAAAATCTCTTGCTGTGATAGATGAGGTGATATTGTACCGGCACTTCATTCCAAGTTATCTTTGGAAGCTGCAAAAATGGCTCCATGTTCGTCAAGAAAAGAAGTTAAGGGAAGCCGAAGAAAATCTTGACCGTTTCTTGTATGAAGGTATAACATTTTCCAAACAAGAGCAAAGCAAGTGCAGCAGCAGTGAATAAATTGATGACTTTGTAAAAGCACTGATGAAGGAAGAATATGGAACAAGGGGAATGGATGAGAAGTATCTTAGAGACAATGCACTCTCTCTCTTTTTAGCAGGAAATGGCACAGTTACTTCAGGTCTCAGTTGGTTTTTCTGGCTTGTTTCAACTCATCCTATTGTGGAAGCCAAAATTATTCAAGAAATAAAAGATAACTGGCCCACACAAGAGGAGAATCAGACTCCTTGGAGAGATGTGGATCTTGATAATCTAGTGTACCTTCATGGAGCTATATGTGAAACCTTGAGGCTTTATCCTCCTGTACCTTTTGAGCATATATGTGCAATCAAATCCGATATACTACCTAGTGGAGAGCGTGTTAGTCCAAATACAAGGTTATTGTACTCTTTGTACGCTATGGGAAGGATGGAACAAATATGGGGAGAAGACTGCATGGAATTTAAGCCTGAGAGATGGGTATCAGAGACAGGACACATTATACATGTTCCATCTTACAAGTTCATAGCTTTCAATACAGGTCCGAGAAGTTGTTTGGGTAAAGATCTTAGTTTCATTCAAATGAAGATGGTCGCAGCTGCTTTGTTACAGAAGTTTCACATACAGGTGGTGGAAGGTCACCCTGTAACCCCAAAGCTTTCATTTGTTCTTCACATGAAACATGGCTTCAAGGTTAAAGTCACTAAAAGATGCATTTGA 1563 0.3852 MHHRHKQFKTYFSKSKMCTIQCVGGLAAILIFLYIHYWRRNRDEFVPINWPIFGMLLALMCNLSNFHDRATLILKHHGGTFRFGGAWFTNTSFIGTSDPMNVEHIASKNFGNYGRGSNFKEIFDFFGDGILNSNSHVWKQQRTMFHSFLKRKTFKNFFQQTMKKKLENYLLPFLNDVSEIGAQVDLEDALSRFTFDSICTIAFGFDPNCLLNKFNELTEIDYQKSLAVIDEVILYRHFIPSYLWKLQKWLHVRQEKKLREAEENLDRFLYEGITFSKQEQSKCSSSE*IDDFVKALMKEEYGTRGMDEKYLRDNALSLFLAGNGTVTSGLSWFFWLVSTHPIVEAKIIQEIKDNWPTQEENQTPWRDVDLDNLVYLHGAICETLRLYPPVPFEHICAIKSDILPSGERVSPNTRLLYSLYAMGRMEQIWGEDCMEFKPERWVSETGHIIHVPSYKFIAFNTGPRSCLGKDLSFIQMKMVAAALLQKFHIQVVEGHPVTPKLSFVLHMKHGFKVKVTKRCI* 521
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mtr1g1149 519 PANTHER CYTOCHROME P450 29 514 - -
Mtr1g1149 519 SUPERFAMILY Cytochrome P450 34 517 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Mtr1g1149 519 Gene3D Cytochrome P450 7 518 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Mtr1g1149 519 PRINTS E-class P450 group I signature 455 465 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Mtr1g1149 519 PRINTS E-class P450 group I signature 309 326 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Mtr1g1149 519 PRINTS E-class P450 group I signature 329 355 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Mtr1g1149 519 PRINTS E-class P450 group I signature 465 488 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Mtr1g1149 519 Pfam Cytochrome P450 47 512 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Mtr1g1149 519 Coils Coil 251 271 - -
Mtr1g1149 519 ProSitePatterns Cytochrome P450 cysteine heme-iron ligand signature. 458 467 IPR017972 GO:0005506|GO:0016705
Mtr1g1149 519 PANTHER CYTOCHROME P450 FAMILY PROTEIN 29 514 - -
Mtr1g1149 519 PRINTS P450 superfamily signature 320 337 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Mtr1g1149 519 PRINTS P450 superfamily signature 377 388 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Mtr1g1149 519 PRINTS P450 superfamily signature 456 465 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Mtr1g1149 519 PRINTS P450 superfamily signature 465 476 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mtr1g1149 Mtr-Chr1 13064355 13066195 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mtr1g1149 19 518 Cytochrome P450 AT4G39500 42.578 2.54e-147 431
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mtr1g1149 - - mtr:MTR_1g035760 991.875