Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mtr1g1148 ATGTTTATTATTCAGTGCATTGGAGCATTTGTAGCAATCCTGTTCTTCTTATTTGTCCATAGTTGGAGACGCAACAGAAATGCAATCGTCCCAAATTGGCCAATACTTGGAATGCTACCATCGACTCTGCATAATATTTCCAATTACTATGATTATATAACCTTAGTTTTGAAACATCATGGTGGCACTTTTAGGTTTGAAGGATCCTGGTTCACAAACTCCACTGGTATCCTTACCAGCGATCCAATGAATGTACACCACATCGTAAGCAAGAATTTTGGAAACTACGAAAAAGGGTCTAATTTCAAAGAAACTTTTGAAACTTTTGGAGCTGGACCTTTAAATTCTGATTCCGATGAATGGAAAAAGGAGAGGACGATGCTTCACTCATTCTTCAAAAGGAAAAACTTTGAAAACTTTCTCAAACAAACAATTCAGAAGAAACTTGAGAATTTCCTACTACCATTTCTTGATCATGCATCCATAGTAAAAGCTCACGTGGACTTGCATGACGCCTTAACAAGGTTCACTTTTGATATCACCTGCACTTTCCTATTTGGATTCGATCCAAATTGCCTTCAAAACAATTTCAGTCATGATCTCGGAGATATCACTTATCATAAAGCTCTTTCTATGATTGAGGAAGCAATAGTCTACAGGGGCTTCTTTCCAACTTTTGTATGGAAGCTGCAGAAATGGCTCCAAATTGGTCAAGAGAAGAAACTCAAAGTAGCTCAAGAAAGTCTTGACAAATTCTTGCATGAATGCATACTATCCAAACTTGAAGAGCAAAACAGATTCAGCAGCACTAGAGAAGTGGAAGATTCCGACTGTGACTTGATAAAAGAGATACTGAAAGGAACGGGAAAAGGGAAAACGAGTGAGAAGTATCTTAGAGACACTGCAGTCAATCTATTGTTAGCGGGAAACGGCACAGTTAGTTCAGGTCTCAGTTGGTTCTTTTGGCTTGTTTCATGTCATCCTGTTGTGGAAGCCAAGATTATTCAAGAGATGAAAGATAATTGTCTATCTGATGATGAAAACTTGATTACTTCAATTGTGGAAAAGCTTGATAAACTAATTTACCTCCACGGAGCTATATGTGAAGCCTTAAGGCTTTATCCTCCTGTACCTATCGAGCAAAAGTTTGCAATCAAAGCTGATATACTTCCTAGTGGAGTCCATGTAAGTCCAAATACAAGGATATTATACTATTTGTATTCAATGGGAAGGATGGAGAAAATATGGGGAGAAGACTGCATGGAATTTAAGCCTGAGAGATGGATATCAAAAAGCGGACAAATTATACATGTACCGTCTTACAAGTTCATAGCTTTCAATGCAGGGCCAAGAAGTTGTTTGGGTAAAGATATCACCTTCGTTGAAATGAAGATGGCTGCCGCGGCTATACTATGGAAGTTTTGCATACATTTAGTGGATGGTCATCCTGTAACTCCAAGGCTTTCTATTACCCTCGGAATGAAACATGGCTTGAAGGTCATAGTCACTAAAAGATGCATTTGA 1524 0.3839 MFIIQCIGAFVAILFFLFVHSWRRNRNAIVPNWPILGMLPSTLHNISNYYDYITLVLKHHGGTFRFEGSWFTNSTGILTSDPMNVHHIVSKNFGNYEKGSNFKETFETFGAGPLNSDSDEWKKERTMLHSFFKRKNFENFLKQTIQKKLENFLLPFLDHASIVKAHVDLHDALTRFTFDITCTFLFGFDPNCLQNNFSHDLGDITYHKALSMIEEAIVYRGFFPTFVWKLQKWLQIGQEKKLKVAQESLDKFLHECILSKLEEQNRFSSTREVEDSDCDLIKEILKGTGKGKTSEKYLRDTAVNLLLAGNGTVSSGLSWFFWLVSCHPVVEAKIIQEMKDNCLSDDENLITSIVEKLDKLIYLHGAICEALRLYPPVPIEQKFAIKADILPSGVHVSPNTRILYYLYSMGRMEKIWGEDCMEFKPERWISKSGQIIHVPSYKFIAFNAGPRSCLGKDITFVEMKMAAAAILWKFCIHLVDGHPVTPRLSITLGMKHGLKVIVTKRCI* 508
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mtr1g1148 507 Pfam Cytochrome P450 31 487 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Mtr1g1148 507 Gene3D Cytochrome P450 28 505 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Mtr1g1148 507 PANTHER CYTOCHROME P450 FAMILY PROTEIN 11 502 - -
Mtr1g1148 507 PANTHER CYTOCHROME P450 11 502 - -
Mtr1g1148 507 ProSitePatterns Cytochrome P450 cysteine heme-iron ligand signature. 446 455 IPR017972 GO:0005506|GO:0016705
Mtr1g1148 507 PRINTS E-class P450 group I signature 297 314 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Mtr1g1148 507 PRINTS E-class P450 group I signature 317 343 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Mtr1g1148 507 PRINTS E-class P450 group I signature 364 382 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Mtr1g1148 507 PRINTS E-class P450 group I signature 443 453 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Mtr1g1148 507 PRINTS E-class P450 group I signature 453 476 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Mtr1g1148 507 PRINTS P450 superfamily signature 308 325 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Mtr1g1148 507 PRINTS P450 superfamily signature 365 376 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Mtr1g1148 507 PRINTS P450 superfamily signature 444 453 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Mtr1g1148 507 PRINTS P450 superfamily signature 453 464 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Mtr1g1148 507 SUPERFAMILY Cytochrome P450 29 505 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mtr1g1148 Mtr-Chr1 13059398 13061407 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mtr1g1148 1 505 Cytochrome P450 AT2G23180 42.054 5.29e-146 427
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mtr1g1148 - - mtr:MTR_1g035760 651.358