Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mtr1g1142 ATGTCCATAATTCAGTGTATTGGAGGATTTGTAGCCATCCTAATCTTCCTATACATCTACTATTGGAGACGCAATAGAGATGAATTTGCACCAATTAATTGGCCAATAATTGGTATGCTACCTGGGATTTTGCATCACCTGTCCAATTTCCATGATCATACAACCTTATTTTTGAAACATCATGGAGGAACATTTCGATTTGAAGGAGCTTGGTTCACAAACACAAGCTTTATCGGTACCAGTGATCCGATGAATGTTGATCACATCGCGAGCAAGAATTTTGGCAACTACGGAAGGGGGTCCAACTTCAAAGAAATTTTTGATTTTTTTGGAGATGGTATTTTAAATTCTAGTTCCCACATATGGAAACAACAGCGAACAATGTTTCATTCATTTCTCAAAAGGAAAACCTTCAAGAACTTTTTCCAACAAACTATGAAGAAAAAGGTGGAGAACTGCTTACTACCATTTCTTAATGATGTATCTGAAATAGGTGCTCAGGTGGACCTGGAGGATGCCTTGAGTAGGTTCACTTTTGACAGCATCTGCACTATTGCATTTGGATTTGATCCTAATTGCCTTCCAAACAAGTTTAATGAGCTAAGAGAAATTGCTTATCAAAAATCTCTTCCTGTTATAGATGAGGTGATAATTTACCGGCACTTCAAACCACGTTGTCTATGGAAGCTGCAAAAATGGCTCGACGTTGGTCAAGAAAGGAAGTTAAAGGAAGCCGAAAAAAATCTTGACAGTTTCTTGTATGAAAGAATAACATTTTCCAAACAAGAGCAAAGCAAGTGCAGCAGCAGTGAAGAAATGGATGATTTTGTAAAAGCACTTATGAAGGAAGGAGCTGGAAACGGGGGAATGGACGAGAAGTATCTTAGAGACAATGTCCTCACTCTCTTTTTAGCAGGAAATGGCACAATTAGTTCAGGTCTCAGTTGGTTTTTCTGGCTTGTTTCAACTCATCCTATTGTGGAAGCCAAAATTATTCAAGAAATCAAAGATAACTGGCCCACACAAGAGGAGAATCAGACTCCTTTGAGAGATGTGGATCTTGATAAGCTAGTGTACCTCCATGGAGCTCTATGTGAAGCCATGAGGCTTTATCCTCCTGTACCTTTTGAGCATATCTGTGCAATCAATTCCGATATACTACCTAGTGGAGAGCGTGTTAGTCCAAATACAAGGTTATTGTACTCTTTGTACGCTATGGGAAGGATGGAACAAATATGGGGAGAAGACTGCATGGAATTTAAGCCTGAGAGATGGGTGTCAGAGAGAGGACACATTATACATGTACCATCTTACAAGTTCATAGCTTTCAATACAGGTCCTAGAAGTTGTATGGGCAAGGATATTAGCTTCATTCAAATGAAGATGGTCGCAGCAGCTTTGTTACCAAAGTTTCACATAAAGGTGGTGGCAGGTCACCCTATAACCCCGAAGCTTTCTTTTGTTCTTCACATGAAACATGGCTTGAAGGTTAAAGTCACTAAAAGATGCATTTGA 1515 0.3941 MSIIQCIGGFVAILIFLYIYYWRRNRDEFAPINWPIIGMLPGILHHLSNFHDHTTLFLKHHGGTFRFEGAWFTNTSFIGTSDPMNVDHIASKNFGNYGRGSNFKEIFDFFGDGILNSSSHIWKQQRTMFHSFLKRKTFKNFFQQTMKKKVENCLLPFLNDVSEIGAQVDLEDALSRFTFDSICTIAFGFDPNCLPNKFNELREIAYQKSLPVIDEVIIYRHFKPRCLWKLQKWLDVGQERKLKEAEKNLDSFLYERITFSKQEQSKCSSSEEMDDFVKALMKEGAGNGGMDEKYLRDNVLTLFLAGNGTISSGLSWFFWLVSTHPIVEAKIIQEIKDNWPTQEENQTPLRDVDLDKLVYLHGALCEAMRLYPPVPFEHICAINSDILPSGERVSPNTRLLYSLYAMGRMEQIWGEDCMEFKPERWVSERGHIIHVPSYKFIAFNTGPRSCMGKDISFIQMKMVAAALLPKFHIKVVAGHPITPKLSFVLHMKHGLKVKVTKRCI* 505
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mtr1g1142 504 PRINTS P450 superfamily signature 305 322 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Mtr1g1142 504 PRINTS P450 superfamily signature 362 373 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Mtr1g1142 504 PRINTS P450 superfamily signature 441 450 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Mtr1g1142 504 PRINTS P450 superfamily signature 450 461 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Mtr1g1142 504 PRINTS E-class P450 group I signature 294 311 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Mtr1g1142 504 PRINTS E-class P450 group I signature 314 340 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Mtr1g1142 504 PRINTS E-class P450 group I signature 440 450 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Mtr1g1142 504 PRINTS E-class P450 group I signature 450 473 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Mtr1g1142 504 Pfam Cytochrome P450 31 492 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Mtr1g1142 504 Gene3D Cytochrome P450 17 503 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Mtr1g1142 504 ProSitePatterns Cytochrome P450 cysteine heme-iron ligand signature. 443 452 IPR017972 GO:0005506|GO:0016705
Mtr1g1142 504 SUPERFAMILY Cytochrome P450 18 502 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Mtr1g1142 504 PANTHER CYTOCHROME P450 FAMILY PROTEIN 13 499 - -
Mtr1g1142 504 PANTHER CYTOCHROME P450 13 499 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mtr1g1142 Mtr-Chr1 12989618 12991151 Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mtr1g1142 2 503 Cytochrome P450 AT4G39500 43.080 4.90e-150 437
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mtr1g1142 - - mtr:MTR_1g035760 874.774