Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mtr1g1122 ATGAATCCTCATAATTCAAACCAAACCTTTCCATCAGCACCACCTGGTTTCTCTTTACCAAACCCAAACCTCAACCTAAACCTAAATCTAAGTCCAAACCTGGAACAACCTAACACCAGCACCACTACCACCACCCCAAGAATGGCGATGATCCCACTTGTTCGAATGATGGATCTAGAGTTACCGGAAAAGCGTCAGTGGCGTAACATTATTCGAAGGACTAGGATGGTGTTTGATTCGGTTCGTGTTTTGGTCATGGCAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGGAAATTTTAATGTTAGGAGAGTGAGAAGTGATTTGAAAGCTTCTGCTACGATGAGGAGTCGAGGATTGTGGCTGAATTGCGATAAGAGGATTGTTGGCGCGATTCCCGGGATTTGTATTGGTGATGTGTTTTTGTATAGGATGGAGTTGTGTGTGGTTGGTTTACATGGTGAACCACAAGCTGGGATCGATTATTTTCCTGGGAGTATGAGTTCAATTGGCGATCCGATTGCTACTAGTGTGATTGTTTCTGGTGGGTATGATGAGGGTGATGTTGACGAAGGTGATGTTATTATTCTCTCGGGTCATGGTAGGCAGGATAAGAATCCGAGGCAGGTTTTTCATCAGAAGATAGAAGGTGGGGATCTTGCTATGGAGAGGAGTATGCATTATGGGATTGAGGTAAGGGTCATTCGTGCTGTGAGGTACCAAGGTACTTCTTCGACTTCAGGTAAGGTTTATGTTTATGATGGTTTGTATAGGATTGTTGAATGCTGCAGGTTTGATGTTGGTAAAAATGGTTTTGGTGTTTTTAAGTTTATGTTATCGAGGATTGATGGTCAAGCTAAGATGGGTAGTTTAGTTTTAAAGGAGGCTTTTTTGCGTAAGCAAGATCCTTCTTGTTATAAACCTATGTGTGTTATATCTCATGATATTTCCAACAAGATGGAGCGTGTTGGTATAAGGCTTTTTAATGATATTGATGAATGTAAAGATCCTATGTATTTTGAGTATCTTCCTAGGGCTACTTTTTTTGCCTTTGAGTTTCATCCAAAGGGGAATGAGACAGGTTGTAAATGTGTGGGCAGTTGTGGGGAAGGATGCATTTGTTTCATGAAAAATGGTAACAGCTTTCCTTATAGTCAAAGCGGGTTTCTCTTGAAAGGAAAGCCGGTCATTTTTGAATGTGGTCCTTCTTGTAGCTGTCTGCCTCATTGTCGGAACCGTGTCACGCAACAAGGGCTTAATCATAGATTGGAAGTGTTTAGATCTTTGGAAACTGGTTGGGGAGTTAGGTCATTCGACCTTATTCAAGCTGGCACGTTTATATGCGAGTACAGTGGCGTTGTTCTAACAAGGGAGCAAGCAGAAATTATGACTATGGGTGGTGATTCATTAATATATCCAAATCGTTTTCCGAAGAGGTGGACGGAATGGGGTAATTTATCTCTGATACAAGATGGTTATGCGCCTCCTTCGTATCCATCAATTCTTCCTTTGAATTTTGCTCTGGACGTGTCTAGAATGAGGAATGTGGCTTGCTATATAAGTCATAGCTCAACGCCAAATCTGATGGTTCAGTTTGTTGTGTATGATTGCAATAATCAATTTTACCTTAAAACTATGCTGTTTGCGATGGAGAACATCCCTCCATTAAGAGAGTTCAGCCTTGATTATGGTGTAGTTGATGATGAGTTGATTCGCAAGCCCGCAATGCACAATTGA 1737 0.4134 MNPHNSNQTFPSAPPGFSLPNPNLNLNLNLSPNLEQPNTSTTTTTPRMAMIPLVRMMDLELPEKRQWRNIIRRTRMVFDSVRVLVMAEEEEEEEEEEGNFNVRRVRSDLKASATMRSRGLWLNCDKRIVGAIPGICIGDVFLYRMELCVVGLHGEPQAGIDYFPGSMSSIGDPIATSVIVSGGYDEGDVDEGDVIILSGHGRQDKNPRQVFHQKIEGGDLAMERSMHYGIEVRVIRAVRYQGTSSTSGKVYVYDGLYRIVECCRFDVGKNGFGVFKFMLSRIDGQAKMGSLVLKEAFLRKQDPSCYKPMCVISHDISNKMERVGIRLFNDIDECKDPMYFEYLPRATFFAFEFHPKGNETGCKCVGSCGEGCICFMKNGNSFPYSQSGFLLKGKPVIFECGPSCSCLPHCRNRVTQQGLNHRLEVFRSLETGWGVRSFDLIQAGTFICEYSGVVLTREQAEIMTMGGDSLIYPNRFPKRWTEWGNLSLIQDGYAPPSYPSILPLNFALDVSRMRNVACYISHSSTPNLMVQFVVYDCNNQFYLKTMLFAMENIPPLREFSLDYGVVDDELIRKPAMHN* 579
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mtr1g1122 578 ProSiteProfiles Histone-lysine N-methyltransferase (EC 2.1.1.43) family profile. 1 578 IPR025794 GO:0016571
Mtr1g1122 578 Gene3D SET domain 290 572 IPR046341 -
Mtr1g1122 578 SMART preset_2 313 405 IPR007728 GO:0005634|GO:0008270|GO:0018024|GO:0034968
Mtr1g1122 578 ProSiteProfiles SET domain profile. 421 564 IPR001214 GO:0005515
Mtr1g1122 578 SMART set_7 421 570 IPR001214 GO:0005515
Mtr1g1122 578 SMART G9a_1 125 285 IPR003105 -
Mtr1g1122 578 ProSiteProfiles Pre-SET domain profile. 360 418 IPR007728 GO:0005634|GO:0008270|GO:0018024|GO:0034968
Mtr1g1122 578 ProSiteProfiles YDG domain profile. 130 281 IPR003105 -
Mtr1g1122 578 Gene3D - 127 289 IPR036987 -
Mtr1g1122 578 Pfam Pre-SET motif 316 413 IPR007728 GO:0005634|GO:0008270|GO:0018024|GO:0034968
Mtr1g1122 578 PANTHER HISTONE-LYSINE N-METHYLTRANSFERASE FAMILY MEMBER SUVH2-RELATED 37 571 - -
Mtr1g1122 578 SUPERFAMILY PUA domain-like 111 296 IPR015947 -
Mtr1g1122 578 Pfam SAD/SRA domain 129 285 IPR003105 -
Mtr1g1122 578 SUPERFAMILY SET domain 306 565 IPR046341 -
Mtr1g1122 578 MobiDBLite consensus disorder prediction 1 44 - -
Mtr1g1122 578 Pfam SET domain 432 564 IPR001214 GO:0005515
Mtr1g1122 578 PANTHER HISTONE-LYSINE N-METHYLTRANSFERASE SETMAR 37 571 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mtr1g1122 Mtr-Chr1 12830358 12832275 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mtr1g1122 68 565 Su(var)3-9 homologs AT5G04940 36.166 6.37e-92 295
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR SET Mtr1g1122 SAD_SRA 1e-39 CL0178
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mtr1g1122 K11420 - gmx:100795514 741.11