Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mtr1g1121 ATGGGGAGGATCAAACCTCAAGCTCTGCTGCAACAAAGCAAAAGGAAGAAGGGCCGTTATCACATGAGTCCAATAAATATTGTATTTTACACATTGACTCTTGTCATATTTGTGTTTTTTCTCTTTGCTACATTCAAATATTGGTCTAATAGGACAAGATTTCAACCAGAGAACCACACATCAGTCTTTGAGGATGAAAATCCTTCTGTGGAATCCAAGAAATTGGATCTACCTGGATATGCTGTTTTAAGAACCTCTAAAGGTTCTATAATAATAGAACTTTACAAGGAAAGTGTTCCTGAAGTTGTCGACGAATTCATTGACTTATGTCAAAAGGGGCACTTCAAAGGGATTCTTTTTCACCAAGTAATTAAGCACTATGTGATTCAGGCAAGTCGTAACAAAGGGTCGGGATCTACTGAAGATTGGAACCAGAGAGGGAAGAAATATACAAGTATGAAACACGATGCATTCATGCTCGGAACTTCTAAGGATAAATACTTCAATAAAGGATTTGATCTTTTCATCACAACTGCACCAATACCAGATCTAAATGAGAAACTTACTGTTTTTGGCCGGGTCGTAAAGGGAGAGGACGTAGTTCAGGAAATTGAAGAAGTGGATACAGATGAACATTATCAACCAAAAATTTCTATTGGGATAATTGATGTGGATCTTAGACAAATGATGTGA 693 0.3723 MGRIKPQALLQQSKRKKGRYHMSPINIVFYTLTLVIFVFFLFATFKYWSNRTRFQPENHTSVFEDENPSVESKKLDLPGYAVLRTSKGSIIIELYKESVPEVVDEFIDLCQKGHFKGILFHQVIKHYVIQASRNKGSGSTEDWNQRGKKYTSMKHDAFMLGTSKDKYFNKGFDLFITTAPIPDLNEKLTVFGRVVKGEDVVQEIEEVDTDEHYQPKISIGIIDVDLRQMM* 231
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mtr1g1121 230 ProSiteProfiles Cyclophilin-type peptidyl-prolyl cis-trans isomerase domain profile. 88 226 IPR002130 GO:0000413|GO:0003755
Mtr1g1121 230 PANTHER PEPTIDYL-PROLYL CIS-TRANS ISOMERASE 1 230 - -
Mtr1g1121 230 PRINTS Cyclophilin peptidyl-prolyl cis-trans isomerase signature 94 109 IPR002130 GO:0000413|GO:0003755
Mtr1g1121 230 PRINTS Cyclophilin peptidyl-prolyl cis-trans isomerase signature 120 132 IPR002130 GO:0000413|GO:0003755
Mtr1g1121 230 PRINTS Cyclophilin peptidyl-prolyl cis-trans isomerase signature 173 185 IPR002130 GO:0000413|GO:0003755
Mtr1g1121 230 PRINTS Cyclophilin peptidyl-prolyl cis-trans isomerase signature 186 201 IPR002130 GO:0000413|GO:0003755
Mtr1g1121 230 SUPERFAMILY Cyclophilin-like 76 226 IPR029000 -
Mtr1g1121 230 CDD cyclophilin 82 223 - -
Mtr1g1121 230 Pfam Cyclophilin type peptidyl-prolyl cis-trans isomerase/CLD 82 224 IPR002130 GO:0000413|GO:0003755
Mtr1g1121 230 Gene3D - 68 227 IPR029000 -
Mtr1g1121 230 PANTHER PEPTIDYL-PROLYL CIS-TRANS ISOMERASE CYP21-4 1 230 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mtr1g1121 Mtr-Chr1 12818036 12821220 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mtr1g1121 79 226 U-box Gene Family AT5G67530 28.105 3.02e-15 72.4
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mtr1g1121 - - gmx:100796043 368.237