Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mtr1g1115 ATGAGTAGTTGTGGAAGGGAAGGTGTTGTGAGACAATATGTAAGATCAAAGGTTCCTCGTTTAAGATGGACACCTGAACTTCATCGTTGCTTTGTTTATGCCATTGAAACTCTTGGTGGTCATCAAAAGGCTACTCCTAAACTTGTTCTTCAGTTGATGGATGTTAAAGGGCTAACAATTTCACATGTTAAGAGCCATTTGCAGATGTATAGGAGTATGAGAGGTGACTCATGCAAACAAGATAGGACTACTTCCGTACATAAAAAACAATCTTTTCAGGAGCATGATGATGATGGATTTGGTGATCATGAATCTCTTGGAATGGAATCTGATTCTCTCTTTAGCTACAGAAATTTCTCCCCAAAAAGAGCTAGAATCGAGAAGAGAAATTCCCTCTCAGGAATCCTTGAATGCAGAGAAAGAATATGTGAAGAAGTTCCAAATCCATACACTACTTTTTATGATTATGTGCAGGACATGGTTCAGCAACAGCAGAAGGGAATAAAGGAGATTTGTTTTGTTGGTCCAATATGGCATACTCCTCAACCACAATATTGCACAATCTTTCCTGTGCTACCAAAACAAGAAACTGATTTGCTCCAGGTTACCAAGTTAAATGAAAAGAAACATGTGAATGAAATTGGCAAGACTAAGAGTGTACGTGCAGAAGATGAGGAAGATATAAGGGGTTGTGAGTTGTCATTATCAATTTCATTGCCCCATATTTCCCCTCAGAGAAGTAATGCTTCTTCAGCCAATGATATGAGAAACTCTGGATTTAGCAACTATATGGGTTGTTCCACTGTCCAAAAAAACATAACTAATTTGGACCTATCTTTGGCCATTTGA 849 0.3828 MSSCGREGVVRQYVRSKVPRLRWTPELHRCFVYAIETLGGHQKATPKLVLQLMDVKGLTISHVKSHLQMYRSMRGDSCKQDRTTSVHKKQSFQEHDDDGFGDHESLGMESDSLFSYRNFSPKRARIEKRNSLSGILECRERICEEVPNPYTTFYDYVQDMVQQQQKGIKEICFVGPIWHTPQPQYCTIFPVLPKQETDLLQVTKLNEKKHVNEIGKTKSVRAEDEEDIRGCELSLSISLPHISPQRSNASSANDMRNSGFSNYMGCSTVQKNITNLDLSLAI* 283
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mtr1g1115 282 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 15 75 IPR017930 -
Mtr1g1115 282 PANTHER MYB-LIKE DNA-BINDING DOMAIN, SHAQKYF CLASS PROTEIN 1 282 - -
Mtr1g1115 282 MobiDBLite consensus disorder prediction 81 101 - -
Mtr1g1115 282 SUPERFAMILY Homeodomain-like 17 72 IPR009057 -
Mtr1g1115 282 Gene3D - 18 74 - -
Mtr1g1115 282 Pfam Myb-like DNA-binding domain 21 71 IPR001005 -
Mtr1g1115 282 TIGRFAM myb_SHAQKYF: myb-like DNA-binding domain, SHAQKYF class 19 72 IPR006447 GO:0003677
Mtr1g1115 282 PANTHER MYB FAMILY TRANSCRIPTION FACTOR PHL7-LIKE 1 282 IPR044848 GO:0003700
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mtr1g1115 Mtr-Chr1 12706713 12711373 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mtr1g1115 1 120 G2-like Transcription Factor Family AT1G14600 50.394 6.58e-33 119
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF GARP-G2-like Mtr1g1115 Myb_DNA-binding 1.4e-05 CL0123
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mtr1g1115 - - gmx:100810994 338.961