Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mtr1g1107 ATGGATTCCCCAATTTTTTACTTACTAGCCCTTGTCTTGTTTTTCATCTTCATGCTTGTGGTACTTACAAAAGGGAGGAATCTTAAGAAAAAAAGTTCAGCTCCAAATCTACCCCCAGGACCATGGAAGCTGCCTATTATAGGACACATACACCATCTTGTTTCCTCTACACCACATCAAAAATTAAGAGATTTGGCCAAAGTGTATGGACCCTTGATGCACTTACAACTTGGAGAGATCTCTGCAATTGTTGTTTCCTCACCAGAGTATGCTAGGGAGGTAATGAAAACTCATGATATCATATTTGCATCTAAGCCTAAAATTGTTGCAATAGACATACTATTATATGGATCCACAGATATTGCATTTTCACCTTATGGAAATTATTGGAGGCAGCTACGAAAAATATGCACAATTGAACTTCTTACGCAAAAACGTGTTAGTTCATTCCGGCCTATAAGAGAAGAAGAGTTCACCAATCTCATCAAAAGTATTGATTCACAACAAGGATCACCCATCAACATCACTCAAGCCGTAGTTACATCAATTATGACTATTACTACAAGGGCTGCGTTTGGAAACAAATGCAAAGGCCAAGAACAGCTCGTATCGTTGGCAAATGGAGAATCAGTTGGAGGAGGTTTTGACATAGGTGAATTGTTTCCTTCAGCTAAATGGCTTCAACTAGTTTCTGGTTTCAGGTCTAAAATTGAGGTATTGCATAGACAAATTGATCTTATATTAGTAAACATCATCAATGAACATAAAGAAGCTAAGTCAAAAGCAAAAGAAGGCGAAGTAGAGGAAGATCTGGTAGATGTTCTTCAAAAATTTCAAGGTGGTAATGATATTGACCAAGATATATGCTTAACTGACAACAATATCAAGGCTATAATCCTGGACATCATTGGTGCTGGAGGTGAAACATCATCCACTACCATAGTTTGGGCAATGGCAGAGTTAGTAAGGGATCCAAGAGTGATGAAGAAAGCACAATATGAAGTGAGAAAAATATTCAACAAGAAAGGAACTGTTGGTGAAAACTATATAAATGAACTCGAATATTTGAAGTTAGTAGTGAAAGAGACTCTAAGGTTACACCCTCCAACTCCTCTTTTACTTAGAGAATGTGGACAAGCATGTGAAATTGAAGGGTATCATATACCAGCCAAAAGTAAGGTGATAGTAAATGCATGGACAATTGGTAGAGATCCAAAGTACTGGACTGAACCAGAGAGGTTTCATCCAGAGAGATTCATTGGTAGCTCTATTGACTACAAAGGAAATAATTTTGAGTACATTCCTTTTGGTGCAGGAAGAAGAATATGCCCAGGCATCACATTTGGTTTGATAAATGTTGAGTTGGCACTTGCATTGTTGTTATATCACTTTGATTGGAGGCTTCCCAATGGAATGAAAGGTGAGGATTTGGACATGACTGAGCAATTTGGGGCTAATGTTAAAAGAAAAAGTGACTTGTACTTGATACCCACTATTCCTCTTCCTTCTAGGATTTAA 1518 0.3775 MDSPIFYLLALVLFFIFMLVVLTKGRNLKKKSSAPNLPPGPWKLPIIGHIHHLVSSTPHQKLRDLAKVYGPLMHLQLGEISAIVVSSPEYAREVMKTHDIIFASKPKIVAIDILLYGSTDIAFSPYGNYWRQLRKICTIELLTQKRVSSFRPIREEEFTNLIKSIDSQQGSPINITQAVVTSIMTITTRAAFGNKCKGQEQLVSLANGESVGGGFDIGELFPSAKWLQLVSGFRSKIEVLHRQIDLILVNIINEHKEAKSKAKEGEVEEDLVDVLQKFQGGNDIDQDICLTDNNIKAIILDIIGAGGETSSTTIVWAMAELVRDPRVMKKAQYEVRKIFNKKGTVGENYINELEYLKLVVKETLRLHPPTPLLLRECGQACEIEGYHIPAKSKVIVNAWTIGRDPKYWTEPERFHPERFIGSSIDYKGNNFEYIPFGAGRRICPGITFGLINVELALALLLYHFDWRLPNGMKGEDLDMTEQFGANVKRKSDLYLIPTIPLPSRI* 506
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mtr1g1107 505 PANTHER CYTOCHROME P450 FAMILY 71 PROTEIN 10 499 - -
Mtr1g1107 505 Gene3D Cytochrome P450 30 493 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Mtr1g1107 505 PANTHER CYTOCHROME P450 71B11-RELATED 10 499 - -
Mtr1g1107 505 PRINTS P450 superfamily signature 305 322 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Mtr1g1107 505 PRINTS P450 superfamily signature 358 369 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Mtr1g1107 505 PRINTS P450 superfamily signature 434 443 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Mtr1g1107 505 SUPERFAMILY Cytochrome P450 38 497 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Mtr1g1107 505 Pfam Cytochrome P450 38 484 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Mtr1g1107 505 PRINTS E-class P450 group I signature 66 85 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Mtr1g1107 505 PRINTS E-class P450 group I signature 90 111 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Mtr1g1107 505 PRINTS E-class P450 group I signature 294 311 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Mtr1g1107 505 PRINTS E-class P450 group I signature 314 340 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Mtr1g1107 505 PRINTS E-class P450 group I signature 357 375 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Mtr1g1107 505 PRINTS E-class P450 group I signature 397 421 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Mtr1g1107 505 PRINTS E-class P450 group I signature 433 443 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Mtr1g1107 505 PRINTS E-class P450 group I signature 443 466 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Mtr1g1107 505 ProSitePatterns Cytochrome P450 cysteine heme-iron ligand signature. 436 445 IPR017972 GO:0005506|GO:0016705
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mtr1g1107 Mtr-Chr1 12584177 12589915 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mtr1g1107 12 498 Cytochrome P450 AT3G26300 40.719 2.02e-130 386
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mtr1g1107 - - gmx:100801936 721.079