Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mtr1g1106 ATGGATTTCAAATTTTTTGACTTAATAGTCCTTGCATCCTTTTTCCTCTTCATACTTGTTGCACTGAAAATAGGGAAGAATCTCAAGGAAAAAAGGTCAGCTCCAAAGCTACCACCAGGACCATGGAAGTTACCTATTATAGGAAGCATACATCATTTAGTTACTTCTACACCACATCGAAAATTAAGAGACTTGGCGAAAATTTATGGACCCTTGATGCACCTACAACTTGGAGAGATCTCTGCAATTGTTGTTTCATCGCCAGAGTATGCTAGGGAGGTACTTAAAACCCATGATGTAATATTTGCATCTAGGCCTAAACTTCTAACTATAGAAATATTGTCATATGATTACACAGATATTGCTTTTTCACCTTATGGAAATTATTGGAGACAACTACGAAAAATATGCACAATGGAGCTTTTCACACAAAAGCGTGTTAGTTCGTTTCAACCAATAAGAGAAGAAGAGCTTAACAATCTCGTAAAAAAGATTGATTCGCAACAAGGGTCGCCCGTCAATATAACTCAGCTTGTAGTTTCATCAACATTTTCTATCATTACAAAGGCTGCGTTTGGCAGCAAAGGCAAAGGCAGAGAAGAGTTTGGATCTATTGGAGATGGAGAATCAATTGCAGGAGGTTTTGACATAGCTGAATTATTTCCTTCAGCGAAATGGCTTCAACGTGTTTCCGGTTTGAGGCCTAAACTGGAGAGGTTGCATAGGCAAATTGATCAAATACTAGAAAACATTGTCACTGAACATAAAGAAGCAAAGTCAAAAGCAAATGAAAGTCAAGGTGGAGAAGAAGAAGATCTGGTAGACGTTCTTCTAAAATTCCAAGGTGGTAATGACAGCAACCAAGATATATGTTTAACTGATAACAATATCAAGTCTATAATCCTGAATATCGTTGGTGCTGGAGGTGATACATCAGCTTCTACTATAGTTTGGGCAATGTCAGAGTTGGTAAGGGATAAAAGAGTGATGAAGAAAGCACAAGATGAGGTAAGAGATATATTCAACATGAAAGGAAATGTTGAAGAAAATTGTATAAATGAACTCACTTATTTAAAGTCAGTTGTGAAAGAGACCTTAAGGTTACATCCTCCAGGTCCTCTTTTACTTCCAAGAGAATGTGGACAAGCATGTGAGATTGATGGGTATCGTATACCAATCAAAAGCAAGGTGATAGTCAATGCATGGGCGATTGGAAGAGATCCAAAGTACTGGACTGAACCAGAGAAGTTTTATCCGGAGAGATTCATCGGTAGCTCTATTGACTACAAAGGGAATAATTTTGAGTACATTCCCTTTGGTGCTGGAAGAAGAATATGTCCAGGTAGCACATTTGGTTTGATAAATGTTGAGTTGGCACTTGCATTGATGTTGTATCACTTTGATTGGAAGCTTCCCAATGGAATGAAAGGTGAGGACTTAGACATGACTGAGCAATTTGGAGCGACCGTCAAAAGAAAAGATGACTTGTATTTGATACCTACAGCTCCTCTTCCTTCTGTGGCAAGATAA 1530 0.3824 MDFKFFDLIVLASFFLFILVALKIGKNLKEKRSAPKLPPGPWKLPIIGSIHHLVTSTPHRKLRDLAKIYGPLMHLQLGEISAIVVSSPEYAREVLKTHDVIFASRPKLLTIEILSYDYTDIAFSPYGNYWRQLRKICTMELFTQKRVSSFQPIREEELNNLVKKIDSQQGSPVNITQLVVSSTFSIITKAAFGSKGKGREEFGSIGDGESIAGGFDIAELFPSAKWLQRVSGLRPKLERLHRQIDQILENIVTEHKEAKSKANESQGGEEEDLVDVLLKFQGGNDSNQDICLTDNNIKSIILNIVGAGGDTSASTIVWAMSELVRDKRVMKKAQDEVRDIFNMKGNVEENCINELTYLKSVVKETLRLHPPGPLLLPRECGQACEIDGYRIPIKSKVIVNAWAIGRDPKYWTEPEKFYPERFIGSSIDYKGNNFEYIPFGAGRRICPGSTFGLINVELALALMLYHFDWKLPNGMKGEDLDMTEQFGATVKRKDDLYLIPTAPLPSVAR* 510
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mtr1g1106 509 ProSitePatterns Cytochrome P450 cysteine heme-iron ligand signature. 439 448 IPR017972 GO:0005506|GO:0016705
Mtr1g1106 509 SUPERFAMILY Cytochrome P450 38 501 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Mtr1g1106 509 PANTHER CYTOCHROME P450 71B11-RELATED 9 502 - -
Mtr1g1106 509 Gene3D Cytochrome P450 28 497 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Mtr1g1106 509 PRINTS P450 superfamily signature 307 324 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Mtr1g1106 509 PRINTS P450 superfamily signature 360 371 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Mtr1g1106 509 PRINTS P450 superfamily signature 437 446 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Mtr1g1106 509 PRINTS P450 superfamily signature 446 457 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Mtr1g1106 509 PANTHER CYTOCHROME P450 FAMILY 71 PROTEIN 9 502 - -
Mtr1g1106 509 Coils Coil 237 257 - -
Mtr1g1106 509 PRINTS E-class P450 group I signature 66 85 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Mtr1g1106 509 PRINTS E-class P450 group I signature 90 111 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Mtr1g1106 509 PRINTS E-class P450 group I signature 182 200 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Mtr1g1106 509 PRINTS E-class P450 group I signature 296 313 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Mtr1g1106 509 PRINTS E-class P450 group I signature 316 342 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Mtr1g1106 509 PRINTS E-class P450 group I signature 359 377 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Mtr1g1106 509 PRINTS E-class P450 group I signature 400 424 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Mtr1g1106 509 PRINTS E-class P450 group I signature 436 446 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Mtr1g1106 509 PRINTS E-class P450 group I signature 446 469 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Mtr1g1106 509 Pfam Cytochrome P450 38 487 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mtr1g1106 Mtr-Chr1 12557261 12559436 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mtr1g1106 14 500 Cytochrome P450 AT3G26310 43.400 1.90e-138 407
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mtr1g1106 - - gmx:102665189 758.829