Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mtr1g1100 ATGAGGAAGGAAGAATCCACTCCGTTTGGCAGACCTTACAATTTCATGGCGCCTCAAGATGATCAAACTCCAAACAAACCTATGTTACCACATTGGACTACAGCTATGCAGGCTTATTACAATCCAGGGTCTACTCCAAGCCCCTTTTATAATCATCCACTTGCAGCTGCTCCTTACTTGTATCATCAGTACATCTTGCAAAATCAGGCAAACAATGTACTACTTCAACGTGATGCTCTACATGATCCCGTGAGGCTCTCCAATAAACCGCACGTAGTTGTTGAGGATGCTGCAAAGGCTTTTTCAGAAATGGTACACAGAAATTTTGGCCAAAAAAACCAAGATTTCAACTTATTTGCTAGAAACTCACAACCTGTAAGTTTAATGACTGGCGAATCAAGAGAATTTGGAAACCAGTCTTCTGCACCCAAAAATGACAGGGATGGAACCTCAATGAGTGCAGCAAGTGGAAGCAAGAGATCACCAGATAGAGATCAAGATGACAGTAACAAAAATTCTCCTTTAACTAAGAAGCATAAATCTAACATGATTACTGCGGATGAAAATTCATCTGGTCTGGCTCAGAATTTGGGGACAGTCATCAAGGAATCTGATGCCGACATTGTTAATGTCGATGCTCAACTTAAAAATATGGAAGGTGATGACATAAGAAAAGAAAGAAAAAGGTTGTCAAACAGGAAATCAGCTAAAAGATCAAAGATAAAGAAACAGCAAGAATGTGAAGAGCTATATAATAAGATAGACACTCTTAAGGATGAAAATTCTGTCCTAGCACAAACGCTAGCTAAGCTTTCTGAGGAATGTCTGGAGCTTGCCAATGAAAATGATTCCATTGAGGAAGAGCTAGTTAAGAAGTATGGACCAGAATCAATTGCAGATCTATTGCTCATTAAGCCTGCTTGA 924 0.3961 MRKEESTPFGRPYNFMAPQDDQTPNKPMLPHWTTAMQAYYNPGSTPSPFYNHPLAAAPYLYHQYILQNQANNVLLQRDALHDPVRLSNKPHVVVEDAAKAFSEMVHRNFGQKNQDFNLFARNSQPVSLMTGESREFGNQSSAPKNDRDGTSMSAASGSKRSPDRDQDDSNKNSPLTKKHKSNMITADENSSGLAQNLGTVIKESDADIVNVDAQLKNMEGDDIRKERKRLSNRKSAKRSKIKKQQECEELYNKIDTLKDENSVLAQTLAKLSEECLELANENDSIEEELVKKYGPESIADLLLIKPA* 308
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mtr1g1100 307 CDD bZIP_plant_GBF1 225 275 IPR045314 GO:0003700|GO:0006355
Mtr1g1100 307 MobiDBLite consensus disorder prediction 176 190 - -
Mtr1g1100 307 MobiDBLite consensus disorder prediction 131 159 - -
Mtr1g1100 307 Coils Coil 240 288 - -
Mtr1g1100 307 PANTHER G-BOX-BINDING FACTOR 3-RELATED 1 307 IPR044827 GO:0003700|GO:0006355|GO:0043565
Mtr1g1100 307 MobiDBLite consensus disorder prediction 1 24 - -
Mtr1g1100 307 PANTHER BZIP TRANSCRIPTION FACTOR 1 307 - -
Mtr1g1100 307 SMART brlzneu 220 284 IPR004827 GO:0003700|GO:0006355
Mtr1g1100 307 MobiDBLite consensus disorder prediction 160 175 - -
Mtr1g1100 307 Pfam bZIP transcription factor 222 282 IPR004827 GO:0003700|GO:0006355
Mtr1g1100 307 Gene3D - 220 282 - -
Mtr1g1100 307 ProSiteProfiles Basic-leucine zipper (bZIP) domain profile. 222 285 IPR004827 GO:0003700|GO:0006355
Mtr1g1100 307 MobiDBLite consensus disorder prediction 131 190 - -
Mtr1g1100 307 SUPERFAMILY Leucine zipper domain 223 279 IPR046347 GO:0003700|GO:0006355
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mtr1g1100 Mtr-Chr1 12518655 12524907 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mtr1g1100 30 301 bZIP Transcription Factor Family AT4G36730 25.352 3.97e-24 98.2
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF bZIP Mtr1g1100 bZIP_1 5.5e-12 CL0018
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mtr1g1100 K09060 - gmx:102665715 292.352