Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mtr1g1090 ATGGCAGCATCTTCACCACAATCTTCCACCACCATCAGCAATCACCAGCAAGAGCTTCCACTAAAAGAAATCCCAGGAACCTATGGCCTCCCTTTCATCGGACCGATTTTGGACCGACATGACTTTTTCTATAACCAAGGCAGAGACAAATTCTTCTCAACAAGAATACAAAAATACAATTCAACAGTCTTCAAAACCAACATGCCACCAGGTCCATTCATTTCCTCAAACCCAAGAGTCATAGCACTCTTAGATGCTTCATCGTTTCCGATCCTCTTCGACAACAAAAAAGTCGAGAAATACAATGTCTTCGATGGTACCTTCATGCCATCGATAGACTTCACTGGAGGCTACCGTGTCTGTCCTTTCTTAGACACAACTGAACCAAACCATGCACTTATCAAAGGTTTACTTCTTAACGTTCTTCTTTCTGGAAAATACTCTTTTATCCCTCTCTTTAAGACTATACTTTCTGATGGTTTTAATGAGATTGAAGAGGGGCTTTCTGGTAAAAGTGGTAAAGCTGATTTTAACTCTATTATGAGTGTGGCTTCGTTTAACTTCATGTTTAGGCTATTTTGTGATAACAATGACCCTTCTGAAACTATCCTTGGTGATCAAGGTCCTAAAATGTTGGACACGTGGATTCTCTTTCAACTTGCTCCAATTGAAACATTAAAACCTCCTAAGCTTTTCAATTATCTTGAAGATCTCTTGCTTCGTACTGTTCCCTTTCCTGCTTGTTTGACAAGGTCCTCATACAAGAAGCTCTACGAAGCATTTTCTTCTTCAGCTGTAACGATTTTAAACGATGCAGAAAAAGCAGGGTTGAAAAGAAGTGAAGCCTGTCACAATCTCATTTTCATGGCAGGCTTCAATGGATACGGCGGATTAAAGAATCAATTCCCAATACTCTTCAAATGGATAGGTTTATGCGGCGAAGAGCTACACAAAGAACTCGCAAACGAGATAAGAACCATTGTAAAAAACGAAGGCGGGGTAACAATTCAGTCGTTAGAAAAAATGTCATTAGTTAAATCCGTTGTTTATGAAGTTTTGAGGATTGAACCTGTCGTTCGTTATCAATATGCAAAAGCAAGAGAAGATTTAATTGTGAAGAGTCACGATGCAGCTTTTGAAATTAAAAAGGGTGAGATGATTTTCGGGTACCAATCTTTTGCTACTAAGGATCCTAGGGTTTTCGATGATGCTGAGATTTTTGTGCCAAAGAGGTTTATTGGAGAAGGTGAGAAGTTGTTGAAATATGTTTTATGGTCGAATGGGAGAGAAACTGAGAACCCTACTGTCGATAATAAACAATGTCCTGCGAAGAATCTTGTTGTGCTTTTGTGTAAATTGTTTTTGGTGGTGTTTTTCTTGCGATATGATACTTTTACGTTTGAGACTAAAGATGCTGTTATTGGTGTTTCTATTACCATTACTTCCCTCACAAAGGCTCCTACAATATGA 1470 0.3884 MAASSPQSSTTISNHQQELPLKEIPGTYGLPFIGPILDRHDFFYNQGRDKFFSTRIQKYNSTVFKTNMPPGPFISSNPRVIALLDASSFPILFDNKKVEKYNVFDGTFMPSIDFTGGYRVCPFLDTTEPNHALIKGLLLNVLLSGKYSFIPLFKTILSDGFNEIEEGLSGKSGKADFNSIMSVASFNFMFRLFCDNNDPSETILGDQGPKMLDTWILFQLAPIETLKPPKLFNYLEDLLLRTVPFPACLTRSSYKKLYEAFSSSAVTILNDAEKAGLKRSEACHNLIFMAGFNGYGGLKNQFPILFKWIGLCGEELHKELANEIRTIVKNEGGVTIQSLEKMSLVKSVVYEVLRIEPVVRYQYAKAREDLIVKSHDAAFEIKKGEMIFGYQSFATKDPRVFDDAEIFVPKRFIGEGEKLLKYVLWSNGRETENPTVDNKQCPAKNLVVLLCKLFLVVFFLRYDTFTFETKDAVIGVSITITSLTKAPTI* 490
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mtr1g1090 489 Gene3D Cytochrome P450 15 488 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Mtr1g1090 489 Pfam Cytochrome P450 315 415 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Mtr1g1090 489 PANTHER CYTOCHROME P450 26 1 487 - -
Mtr1g1090 489 SUPERFAMILY Cytochrome P450 20 472 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Mtr1g1090 489 PRINTS E-class P450 group IV signature 342 358 IPR002403 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Mtr1g1090 489 PRINTS E-class P450 group IV signature 379 393 IPR002403 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Mtr1g1090 489 PRINTS E-class P450 group IV signature 395 413 IPR002403 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Mtr1g1090 489 PRINTS E-class P450 group IV signature 441 459 IPR002403 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Mtr1g1090 489 PANTHER FATTY ACID HYDROPEROXIDE LYASE 1 487 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mtr1g1090 Mtr-Chr1 12452453 12455569 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mtr1g1090 2 486 Cytochrome P450 AT5G42650 48.460 7.68e-167 479
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mtr1g1090 K01723 - gmx:100801764 697.967