Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mtr1g1089 ATGGCTTCTTCAAAACAAGAACAATCTTCCACCAACAAAGAGCTCCCACTAAAACAAATCCCAGGCAGCTATGGCCTCCCTTTCATCGGACCGATCTTCGACCGACACGACTACTTCTACAACCAAGGAAGAGACAAATTCTTCTCAACAAGAATCCAAAAATACAACTCAACAATCTTCAGAACCAACATGCCACCAGGTCCCTTCATTTCCTCAAACCCAAGAGTCATAGCACTCTTAGACGCCGCATCTTTCCCGATACTCTTCGACAACAAAAAAGTCGAAAAACTCAACGTCCTCGACGGCACATTCATGCCGTCGACAAAATTCACCGGTGGTTACCGTGTATGTGCTTACCTAGACACAACTGAACCAAACCATGCACTTATCAAAGGTTTCTATCTTAATACTCTTTTATTAAGAAAAGACACTTTTATCCCTCTCTTTAAGACTATACTTTCTGATGGTTTTAATGAGATTGAAGATGGGCTTTCTAGTAAAAGTGGTAAAGCTGATTTTAACTCTATGGTGAGTGTGGCTTCGTTTAACTTCATGTTTAAGCTATTTTGTGATGATAAAAACCCTTCTGAAACTATCCTTGGTGATCAAGGTCCTAAAATGTTTGATACTTGGTTACTCTTTCAACTTGCTCCACTTGCAACTTTAGGACCTCCTAAGATTTTCAATTATCTTGAAGATATCTTGCTACGTACGGTGCCCTTTCCTGCTTGTTTGACAAGGTCCTCTTACAAGAAGCTCTATGAAGCATTTTCTACTTCAGCTACAACAATGTTAAACGAAGCCGAAAAAGCCGGTTTAAAAAGAAGCGAAGCTCTCCACAATATCATTTTCACCGCAGGCTTCAATGCATACGGTGGCCTAAAGAATCAATTCCCAATCCTCTTCAAATGGTTAGGTTCATCTGGCGAAGAGCTTCACAAAGAACTCGCAAACGAGATAAGAACCGTGGTAAAACAAGAAGGCGGAGTAACAATTCAGTCGTTAGAAAAAATGCCGTTAGTTAAATCAGTTGTCTATGAAGCGATGCGAATTGAACCTGCTGTGCCTTATCAATATGCAAAAGCAAGAGAAGATTTAATCGTGAAGAGTCACGACGCGGCTTTTGAAATAAAAAAGGGTGAGATGATATTTGGATACCAACCTTTCGCGACAAAAGATCCTAGGGTTTTCGATGATCCTGAGGTTTTTGTGGCGAAGAGGTTTGTCGGCGAAGGTGAGAAGTTATTGAAGTATGTTTTGTGGTCTAATGGGAAAGAAACTGAAGAGCCTTCTGTGGGGAATAAACAATGTCCTGGGAAGAATCTTGTTGTGCTTTTGTGTAGATTGTTATTGGTGGAGTTTTTCTTGCGTTATGATACTTTTGAGAATGAGACTAAAAATAATGCTTTTGGTGCTGCTGTTTCCATTACTTCACTCACCAAGGCTTCTAGTGTTTGA 1458 0.4033 MASSKQEQSSTNKELPLKQIPGSYGLPFIGPIFDRHDYFYNQGRDKFFSTRIQKYNSTIFRTNMPPGPFISSNPRVIALLDAASFPILFDNKKVEKLNVLDGTFMPSTKFTGGYRVCAYLDTTEPNHALIKGFYLNTLLLRKDTFIPLFKTILSDGFNEIEDGLSSKSGKADFNSMVSVASFNFMFKLFCDDKNPSETILGDQGPKMFDTWLLFQLAPLATLGPPKIFNYLEDILLRTVPFPACLTRSSYKKLYEAFSTSATTMLNEAEKAGLKRSEALHNIIFTAGFNAYGGLKNQFPILFKWLGSSGEELHKELANEIRTVVKQEGGVTIQSLEKMPLVKSVVYEAMRIEPAVPYQYAKAREDLIVKSHDAAFEIKKGEMIFGYQPFATKDPRVFDDPEVFVAKRFVGEGEKLLKYVLWSNGKETEEPSVGNKQCPGKNLVVLLCRLLLVEFFLRYDTFENETKNNAFGAAVSITSLTKASSV* 486
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mtr1g1089 485 SUPERFAMILY Cytochrome P450 16 460 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Mtr1g1089 485 PANTHER FATTY ACID HYDROPEROXIDE LYASE 9 483 - -
Mtr1g1089 485 PANTHER CYTOCHROME P450 26 9 483 - -
Mtr1g1089 485 Gene3D Cytochrome P450 11 484 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Mtr1g1089 485 Pfam Cytochrome P450 311 461 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Mtr1g1089 485 PRINTS E-class P450 group IV signature 338 354 IPR002403 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Mtr1g1089 485 PRINTS E-class P450 group IV signature 375 389 IPR002403 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Mtr1g1089 485 PRINTS E-class P450 group IV signature 391 409 IPR002403 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Mtr1g1089 485 PRINTS E-class P450 group IV signature 437 455 IPR002403 GO:0004497|GO:0005506|GO:0016705|GO:0020037
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mtr1g1089 Mtr-Chr1 12437875 12440600 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mtr1g1089 12 483 Cytochrome P450 AT5G42650 50.000 8.45e-171 489
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mtr1g1089 K01723 - gmx:100801764 744.191