Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mtr1g1077 ATGGATCCTACTATGAACCATGTTGGACATGGAGGAATGGATATACAGATTATGCATGAGAGTGATAGATATGAGCTTGTACGTGATATTGGTTCTGGGAATTTTGGAGTGGCTAGGCTTATGAGAGATAAACACACTAATCAACTTGTTGCTGTCAAGTATATTGAGAGAGGTGATAAGATAGATGAAAATGTACAAAGGGAAATTATAAATCATAGATCACTGAGGCATCCCAATATTGTCAGGTTCAAGGAGGTCATACTTACCCCTACACATTTAGCTATTGTGATGGAATATGCTTCCGGAGGAGAGCTATTTGAGCGAATATGCAATGCAGGACGGTTCAGCGAGGATGAGGCACGGTTTTTCTTCCAACAACTTATATCAGGGGTTAGCTACTGTCATGCAATGCAAGTATGCCATCGTGATTTGAAGTTGGAGAATACATTGCTTGATGGTAGTCCGGCTCCCCGTTTGAAGATTTGTGATTTTGGGTATTCAAAGTCATCAGTGCTACATTCACAACCAAAATCTACGGTCGGTACCCCTGCTTATATCGCTCCTGAAGTTTTGCTCAAAAAGGAATACGATGGCAAGATTGCAGATGTGTGGTCTTGCGGGGTGACCTTATATGTCATGTTGGTGGGTGCGTATCCTTTCGAGGATCCGGAGGAGCCTAAAAATTTCCGGAAGACTATTCATAGGATTTTGAAAGTCCAATACTCAATACCTGATTATGTTCAAATATCTCCCGAGTGCCGTCATCTGATCTCAAGGATCTTCGTTGGAGACCCTGCACAGAGAATAAGCATGCCGGAGATTCGAAACCATGATTGGTTTTTGAAGAACCTTCCAGCTGATCTTATCGTGGGGAATACAACAAGCGAGCAGTTTCAGGAGCCTGAACAACCAATGCAAACAATTGAAGAAATAATGCAGATAATTAGCGAGGCTACTATTCCAGCAGCCGGAACTCATCAGTCTCTCACTCAGTATCTTACTGGTAGCTTGGACATCGATGACGAAATGGACGAGGATATAGATACTGATCCCGATCTTGATATCGATAGCAGTGGTGAAATAGTATATGCAATGTAA 1098 0.4226 MDPTMNHVGHGGMDIQIMHESDRYELVRDIGSGNFGVARLMRDKHTNQLVAVKYIERGDKIDENVQREIINHRSLRHPNIVRFKEVILTPTHLAIVMEYASGGELFERICNAGRFSEDEARFFFQQLISGVSYCHAMQVCHRDLKLENTLLDGSPAPRLKICDFGYSKSSVLHSQPKSTVGTPAYIAPEVLLKKEYDGKIADVWSCGVTLYVMLVGAYPFEDPEEPKNFRKTIHRILKVQYSIPDYVQISPECRHLISRIFVGDPAQRISMPEIRNHDWFLKNLPADLIVGNTTSEQFQEPEQPMQTIEEIMQIISEATIPAAGTHQSLTQYLTGSLDIDDEMDEDIDTDPDLDIDSSGEIVYAM* 366
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mtr1g1077 365 Gene3D Transferase(Phosphotransferase) domain 1 100 288 - -
Mtr1g1077 365 CDD STKc_SnRK2-3 23 279 - -
Mtr1g1077 365 PANTHER SERINE/THREONINE-PROTEIN KINASE SRK2E 15 360 - -
Mtr1g1077 365 ProSiteProfiles Protein kinase domain profile. 24 280 IPR000719 GO:0004672|GO:0005524|GO:0006468
Mtr1g1077 365 SMART serkin_6 24 280 IPR000719 GO:0004672|GO:0005524|GO:0006468
Mtr1g1077 365 SUPERFAMILY Protein kinase-like (PK-like) 17 316 IPR011009 -
Mtr1g1077 365 ProSitePatterns Serine/Threonine protein kinases active-site signature. 139 151 IPR008271 GO:0004672|GO:0006468
Mtr1g1077 365 ProSitePatterns Protein kinases ATP-binding region signature. 30 53 IPR017441 GO:0005524
Mtr1g1077 365 PANTHER SERINE/THREONINE KINASE 15 360 - -
Mtr1g1077 365 Gene3D Phosphorylase Kinase; domain 1 5 99 - -
Mtr1g1077 365 Pfam Protein kinase domain 24 280 IPR000719 GO:0004672|GO:0005524|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mtr1g1077 Mtr-Chr1 12278800 12282007 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mtr1g1077 23 310 CBL-interacting serine-threonine protein kinases AT5G25110 42.000 1.34e-68 221
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK CAMK_OST1L Mtr1g1077 Pkinase 3.1e-72 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mtr1g1077 K14498 - gmx:100804702 645.966