Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mtr1g1048 ATGCCTCGTAGCTTCCAAATTAGAGCAACTTCGGTTACCATATTTGCTCATTTGTTATTCATAGCAATAACAACACTTATGTTAGTTTGGTTGTTACACTTCCGTGGAGGCGTTGCTTTCAATTCCTCCAACAAAATTAAGATTTTCAATCTCCATCCACTTCTAATGGTAATTGGGTTTATCTTGGTAGGTGGAGAAGCTATCATAACATACAAGTCCATCCCTGGAAAAAGAAGCTCAGCAAAGGTGGTTCACCTTTTATTGCATGTAATAGCTCTAGCATCAGGAATTTTAGGAATTATTGCAGTTTTCAAATCTAAAAAAGAGGCAGATCTTCCTAATATGTTTACGTTACACTCTTGGTTAGGCATAGCAGCAATCTCTGCATATGGTTTGCAGTATATAGTGGCCTTCTTTGCTTACTTCTTCCCAGGAGCAGAATCTTCTGCAAAAGCTACATTTTTACCATGGCACAAGTTCATAGGAATGGTAATATTCTTCCTTGCAGTTGGCACAGCAGAGACGGGTTTGGTTGAATATTCTCGATTTTTAGATCTCTTCAGAAACCAAGAGTCACTAATAGTCAATTTCACTGGTCTCTTGCTGTTTTTGTTTGCTGTCTTTGTTAGCCTCTCTGTCATTCTTCCAAGAAATTACTGA 660 0.3818 MPRSFQIRATSVTIFAHLLFIAITTLMLVWLLHFRGGVAFNSSNKIKIFNLHPLLMVIGFILVGGEAIITYKSIPGKRSSAKVVHLLLHVIALASGILGIIAVFKSKKEADLPNMFTLHSWLGIAAISAYGLQYIVAFFAYFFPGAESSAKATFLPWHKFIGMVIFFLAVGTAETGLVEYSRFLDLFRNQESLIVNFTGLLLFLFAVFVSLSVILPRNY* 220
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mtr1g1048 219 SMART 561_7 51 177 IPR006593 -
Mtr1g1048 219 ProSiteProfiles Cytochrome b561 domain profile. 15 214 IPR006593 -
Mtr1g1048 219 PANTHER CYTOCHROME B561 FAMILY PROTEIN, EXPRESSED 4 216 - -
Mtr1g1048 219 PANTHER CYTOCHROME B561-RELATED 4 216 IPR043205 GO:0016491
Mtr1g1048 219 Pfam Eukaryotic cytochrome b561 51 181 IPR006593 -
Mtr1g1048 219 Gene3D - 4 219 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mtr1g1048 Mtr-Chr1 11974301 11975702 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mtr1g1048 6 212 Chloroplast and Mitochondria Gene Families AT4G25570 46.226 2.99e-65 201
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mtr1g1048 K08360 - gmx:100785824 322.783
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Mtr1g1048 1 11974301 11975702 Mtr1g1048 1 11974301 11975702 ECH