Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mtr1g1044 ATGCAGCAAAACAAAAACCCATTCCCAATCTCACTACACAACACACATGTAAAGCTATTAGCTTTCGATCTTCTAACCCTAACCCCACCGATCTCCCCAAACCACTCCTTCACCCGCAACTCTATCTCCATCACACGCGCCGAAACCGTAGGAACCATAACCCTCCGCGACCACAAACCCTTCAAATTCCTCCGTTTCGCTATCGACGACGGAACGGGTTGCATCCCTTGCATTCTCTGGCTTAATCATATGACTTCTCCTCATTTAGCTCGCCGGCGTAGTCCTCAGGATCTCTGTCTTCTTGCTGATGCTGCTGCGAGATCGGCGGAAGTGGTGAAGTTTGGGAATGTTGCTAGGGTTAGAGGGAGGGTTACGGAGTATAAAGGAGGGGTGCAGATAACTGTTACGGATGTTGTTAGTGAGAGGGATCCGAATGTTGAGGTTTTGCATTGGGTTGAGTGTGTTAATTTGGCTAGGAATTGTTATAATCTTGTTAATGTTTCTTCTTCTTCTGGTTCAGTAGTACCTAAATTGAATTAG 540 0.4648 MQQNKNPFPISLHNTHVKLLAFDLLTLTPPISPNHSFTRNSISITRAETVGTITLRDHKPFKFLRFAIDDGTGCIPCILWLNHMTSPHLARRRSPQDLCLLADAAARSAEVVKFGNVARVRGRVTEYKGGVQITVTDVVSERDPNVEVLHWVECVNLARNCYNLVNVSSSSGSVVPKLN* 180
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mtr1g1044 179 Gene3D - 11 165 IPR012340 -
Mtr1g1044 179 SUPERFAMILY Nucleic acid-binding proteins 34 156 IPR012340 -
Mtr1g1044 179 PANTHER CST COMPLEX SUBUNIT STN1 11 165 - -
Mtr1g1044 179 Pfam OB-fold nucleic acid binding domain 53 138 IPR004365 GO:0003676
Mtr1g1044 179 PANTHER REPLICATION PROTEIN A-RELATED 11 165 IPR040260 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mtr1g1044 Mtr-Chr1 11910744 11911708 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mtr1g1044 40 157 Core DNA Replication Machinery Family AT2G24490 27.966 3.26e-10 55.8
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mtr1g1044 K23312 - csin:114287844 199.134