Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mtr1g1033 ATGGTGAAGCGTAGTTTACCAAATGGAAAAGAAGATTGGCTTGATGCACTTTTGATGGATAGGTTTGGAAATTGCAAAAACCACAAAGAAAAGTTTAATGAGAAGAATGTGTTTTGTTTGGATTGTGGAATCAGTTTTTGTAGGTATGATAAGGAATCTCATTCTCTTCATCGAAAGGTTCAGATATACAGATATTGCTATGTAGATGTTGCAAAATATACTGACCTACTCAAGTATTTTGATTGCTCATATATTCAGACTTATATATCAAACAATGACAAGATTGTGCTTATCAAACCCCGACCACCAAAGACATCAACATCTCAAAAGCAAGCTGGTGGAATTTGTGAAGAATGTGGTAAACAGTTGCAAGATAAACGTAACAGATTCTGTTCCATCAAATGCAAGATCACAATTGAGGAGCTTGGAATCAACCAAGATGATCACCAAAATTCAGAGGCTGAGTCATCTATTTCTACTGATGAACCAAATGAATCTGGTGAAAGAGTGAATTTGAGAAAGCGTCCAAGGAAAAGCACTCCTATAAGATCTATCTCTAGTTTTGTAAATGATTATTGA 579 0.3523 MVKRSLPNGKEDWLDALLMDRFGNCKNHKEKFNEKNVFCLDCGISFCRYDKESHSLHRKVQIYRYCYVDVAKYTDLLKYFDCSYIQTYISNNDKIVLIKPRPPKTSTSQKQAGGICEECGKQLQDKRNRFCSIKCKITIEELGINQDDHQNSEAESSISTDEPNESGERVNLRKRPRKSTPIRSISSFVNDY* 193
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mtr1g1033 192 MobiDBLite consensus disorder prediction 146 192 - -
Mtr1g1033 192 MobiDBLite consensus disorder prediction 149 165 - -
Mtr1g1033 192 Pfam PLATZ transcription factor 64 137 IPR006734 -
Mtr1g1033 192 PANTHER PLATZ TRANSCRIPTION FACTOR FAMILY PROTEIN 10 159 - -
Mtr1g1033 192 PANTHER PLATZ TRANSCRIPTION FACTOR FAMILY PROTEIN 10 159 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mtr1g1033 Mtr-Chr1 11750424 11752639 Dispersed/Wgd
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF PLATZ Mtr1g1033 PLATZ 2.4e-21 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mtr1g1033 - - mtr:MTR_1g032880 327.02
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Mtr1g1033 1 11750424 11752639 Mtr1g1033 1 11750424 11752639 ECH