Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mtr1g0965 ATGTCTTCCTTAACCTTTGTTGTGCTGTTACTAATACTGATATTCTCGTATAACAAAGTGTATGGTGATGAACACCAAGACTCATGTTCTCGATGGTGCGGTGTTCATAACATCAGGTCTCCTTTCCGCTTGAAAGACAGTCCTAAAGAATGTGGCGACGAAAGGTACAACCTATCATGTGAGGACAACAATCAATTGATTTTGTACCATGATTCATTTGGAAAATACTATGTACAATCAATTAATTACAACAACTTCACCATACGACTATTGGATTTCAATCTTGCTTCTTCTAATAATTTCATCCCTCCTTATTATTCTTTAGGGCTTTATAATTTCAGTTCTAATTCCATCGTCTCACCCTACCTAGCCTTTAGATACTACAAAAACAATACTCTTAATGTATTGACGAAATCTATGTTATATATGAGTTGTCCAAATCGGATGGAATACTCATACATTGGTAATTGTATGAATAGAACTTCAAATTCACAGGATGTGAATTCTTTCTATGTTGGTAGCTATGGTAAATCTCTGTCGGAATTCGGGCTGGGAGATGGGTGTCGTATACAGTTTATGTATCTCACTTCTTTGGATGTTGAAGATGATGGTGCTGATCACAACAACAACAACATTTCTTGCGCGGATATCCGTCGTGAGATGTTTTATGGATTTGAACTTTCTTGGCTCAACAGTTTTTGTAAATTAGATGTTTCGTATGCGTATGCGGAGCTCGATCAAAATAACCAGGCTCACTGTAATTATGCTTACTGGAATAATGTGGCTTGGATAGTTGCATGTTTATCGAGTCGCACAGTTGCATTGGTTGTTTTTCTTAGCGGTGTTAAATTTGTTCTTGGAGCGCCATTGATCATTGCACTAGTAATCTACAAATGGCGACGGAAACATCTATCAATGTATGATGGCATCGAAGATTTTCTACGTAGTGACAATAGCATCATGCCTATTAGGTATTCTTACAAAGACATAAAAAGGATAACTGAACAATTCAAGACAAAACTAGGCAATGGAGGTTATGGATCCGTTTTTAAAGGACAACTTCGAAGTGGTCGTCTGGTAGCAGTCAAATTATTGGATAGAGCCAAGTCCAACGATCGAGATTTTGTCAATGAAGTTGCTACCATTGGTAGGATCCACCATGTTAATGTGGTACAACTCATTGGTTTTTGTGTGGAAGGTTCAAAACGTGTTCTGATATATGAATTTATGCCAAATGGATCACTCGAAAAATACATATTTTCTCATAATGAAGAAAATTATTCCTTGAGTTGCGAACAATTGTATTCAATTTCTCTTGGAGTGGCTCGAGGCATTGAGTACTTGCATAATGGATGCGATATGAAAATTCTACACTTTGACATAAAGCCTCATAACATCCTTCTTGATGAGAATTTCAACCCAAAAGTTTCTGATTTTGGACTAGCTAGACTTTGTCCTACAGATAAAAGCATTGTCACATTAACTGCAGCAAGAGGAACCATTGGATATATGGCCCCTGAACTATTCTACCGAAATGTCGGCACAATATCTTACAAAGCTGATGTTTATAGTTTTGGGATGTTGTTGATGGAGATGGCAAATAGAAGGAAGAACTTGAATGCATTGGCTGATCAATCAAGCCAGATTTATTTCCCTTTTTGGGTTTATGATCAGTTACAAGATGGAAGGGAAATGACAATTCTGAATGATACAAATCATGAAATGAAATTGGCAAAGAAAATGATGATAGTGGCTTTGTGGTGTATTCAGGCGAAACCTAGTGATCGTCCTCCAATGGATAAAGTGTTGGAGATGCTTGAAGAAGAAGATGAAGATTTGCAAATGCCTAATAAGCCTGACTATTATGTACAAGATGAGGATACTAGAGATGATAGAACTGGTAGTTCATGGTATTCCTCTGGTACATCAGTAACTGATACCAAGTAA 1947 0.3713 MSSLTFVVLLLILIFSYNKVYGDEHQDSCSRWCGVHNIRSPFRLKDSPKECGDERYNLSCEDNNQLILYHDSFGKYYVQSINYNNFTIRLLDFNLASSNNFIPPYYSLGLYNFSSNSIVSPYLAFRYYKNNTLNVLTKSMLYMSCPNRMEYSYIGNCMNRTSNSQDVNSFYVGSYGKSLSEFGLGDGCRIQFMYLTSLDVEDDGADHNNNNISCADIRREMFYGFELSWLNSFCKLDVSYAYAELDQNNQAHCNYAYWNNVAWIVACLSSRTVALVVFLSGVKFVLGAPLIIALVIYKWRRKHLSMYDGIEDFLRSDNSIMPIRYSYKDIKRITEQFKTKLGNGGYGSVFKGQLRSGRLVAVKLLDRAKSNDRDFVNEVATIGRIHHVNVVQLIGFCVEGSKRVLIYEFMPNGSLEKYIFSHNEENYSLSCEQLYSISLGVARGIEYLHNGCDMKILHFDIKPHNILLDENFNPKVSDFGLARLCPTDKSIVTLTAARGTIGYMAPELFYRNVGTISYKADVYSFGMLLMEMANRRKNLNALADQSSQIYFPFWVYDQLQDGREMTILNDTNHEMKLAKKMMIVALWCIQAKPSDRPPMDKVLEMLEEEDEDLQMPNKPDYYVQDEDTRDDRTGSSWYSSGTSVTDTK* 649
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mtr1g0965 648 SUPERFAMILY Protein kinase-like (PK-like) 316 607 IPR011009 -
Mtr1g0965 648 Gene3D Transferase(Phosphotransferase) domain 1 410 620 - -
Mtr1g0965 648 MobiDBLite consensus disorder prediction 634 648 - -
Mtr1g0965 648 Pfam Protein kinase domain 338 604 IPR000719 GO:0004672|GO:0005524|GO:0006468
Mtr1g0965 648 ProSitePatterns Protein kinases ATP-binding region signature. 341 363 IPR017441 GO:0005524
Mtr1g0965 648 Gene3D Phosphorylase Kinase; domain 1 310 409 - -
Mtr1g0965 648 PANTHER RUST RESISTANCE KINASE LR10-RELATED 274 631 IPR045874 GO:0004672
Mtr1g0965 648 PANTHER RUST RESISTANCE KINASE LR10-RELATED 6 236 IPR045874 GO:0004672
Mtr1g0965 648 ProSitePatterns Serine/Threonine protein kinases active-site signature. 456 468 IPR008271 GO:0004672|GO:0006468
Mtr1g0965 648 ProSiteProfiles Protein kinase domain profile. 335 613 IPR000719 GO:0004672|GO:0005524|GO:0006468
Mtr1g0965 648 SMART serkin_6 335 606 IPR000719 GO:0004672|GO:0005524|GO:0006468
Mtr1g0965 648 MobiDBLite consensus disorder prediction 606 648 - -
Mtr1g0965 648 Pfam Wall-associated receptor kinase galacturonan-binding 29 92 IPR025287 GO:0030247
Mtr1g0965 648 PANTHER STRESS-INDUCED RECEPTOR-LIKE KINASE 274 631 - -
Mtr1g0965 648 PANTHER STRESS-INDUCED RECEPTOR-LIKE KINASE 6 236 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mtr1g0965 Mtr-Chr1 11130604 11133254 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mtr1g0965 269 640 Receptor kinase-like Gene Family AT4G18250 45.855 9.21e-107 336
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRK10L-2 Mtr1g0965 Pkinase 1.1e-47 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mtr1g0965 - - aip:107605930 709.523