Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mtr1g0964 ATGAACACTTATTCTCATGTTATGGGATGGTTGTTGTTCGTGTTTTACCTTAATATGTTCGTGCATGGAACAACAACATGTCCAGAAGATTTAACATGTGGAAATCAAGTTATCAAGTTCCCTTTCCGAATCAAAAACCGTCAATCACCCATGTGTGGCTATTCAGGATTTGAGTTATTTTGTACATCAAATAATGAAACTATCATTGAACTTCCACACAAAGTGAAACTCAATGTCAAGAACATTGACTACAAACACCAAACTATTCAACTATCCGATCCACAAAGTTGTCTTTACAAACATATCCACAACCTTAATCTTTCAGAATCTCATTTCAACTACTTGAAACATGACTATGATGATTTTGTCGACTATCACTTTATCAATTGTTCACTTTTGATTAGAGACGACATAGATTCTTATTTGGTTCCATGTCTAAGTACCTCAACCTCTCAGACATATGCTATATCTTCTTTTACCGTTATTGACAGCTTTCCTCTTTCGCTTTGCACCAAAATGTTTAACGTTTCAACAAATGTTATTGATTTTCTAGACAAAAACTCTCTTCGTTTGATGTGGTCTGAGCCTAGTTGTAAACATTGTGAATCAAAAGGAAAAATATGTGGTTGGAAGAATACTGTTGGTAATAGTACCAACAAGGAAGTAGATTGTTTCCCCAAAAAGAAGAAAGGTTCATCAAAGGCTCTAGTGAACACAGGATCAATTTTAGGATCATTGTTTTTTATCTTGTTGATTGGTGGAATCTACCATATTTATGACTCTTACATACTAAAGAAAGAAAAACAAGCAATTGTAGAAAAGTTTTTAGAAGACTATAGAGTTCTTAAGCCCACCAGATACTCTTATGTAGAAATCAAGAGAATCACAAATAATTTCGGGGATATGTTAGGACAAGGAGCCTATGGAACTGTTTATAAAGGAAGCATTTCAAAAGAATTTAGTGTTGCTGTGAAGATACTAAATGTTTCTCAGGGAAATGGCCAAGACTTCCTAAATGAAGTTGGTACAATGAGTAGAATCCACCATGTTAATATTGTCCGATTGGTCGGTTTCTGTGCTGATGGATTTAAAAGAGCTCTTATTTATGAATATTTACCAAATGGTTCTCTGCAAAAGTTCATAAATTCACCGGACAACAAGAAAAACTTCCTTGGCTGGAAAAAGTTGCACGAAATTGCTTTAGGAATAGCTAAAGGAATTGAATATCTTCATCAAGGTTGTGATCAACGCATCCTCCATTTCGATATCAAGCCACAAAATGTGTTACTTGACCATAACTTTATTCCAAAAATATCTGACTTTGGTCTAGCTAAATTATGTTCAAGGGATCAGAGCATAGTATCAATGACTGCAGCTAGAGGAACATTGGGGTACATTGCTCCAGAAGTTTTTTCAAGGAACTTCGGAAATGTGTCTTACAAATCAGATGTTTACAGTTATGGAATGATGTTGCTTGAAACAATAGGAGGAAGGAAGATCACAGAGGACTTAGAGGAAAACAGTAGTCATGTTTACTATCCGGAATGGATTTATAATCTTATAGATGATGAAGAGGAAATGAAAATTCATATTGATGATGAAGGGGATGAAAAAATTGCAAGAAAAATGGCCATTGTGGGACTATGGTGCATTCAGTGGCATGCTATGGATCGACCATCAATGCAAATGGTGGTTCAGATGTTGGAGGAAAATATAGACAAAACTCCAATACCTCCCAATCCTTTTGATTCCCAATCTAGACAACCTAGGAGGACTGATGCAACTGCAACTACTAGACAAGTAACCCACAATTTAGATGTAATTCAAGAGATAGATTGA 1839 0.3545 MNTYSHVMGWLLFVFYLNMFVHGTTTCPEDLTCGNQVIKFPFRIKNRQSPMCGYSGFELFCTSNNETIIELPHKVKLNVKNIDYKHQTIQLSDPQSCLYKHIHNLNLSESHFNYLKHDYDDFVDYHFINCSLLIRDDIDSYLVPCLSTSTSQTYAISSFTVIDSFPLSLCTKMFNVSTNVIDFLDKNSLRLMWSEPSCKHCESKGKICGWKNTVGNSTNKEVDCFPKKKKGSSKALVNTGSILGSLFFILLIGGIYHIYDSYILKKEKQAIVEKFLEDYRVLKPTRYSYVEIKRITNNFGDMLGQGAYGTVYKGSISKEFSVAVKILNVSQGNGQDFLNEVGTMSRIHHVNIVRLVGFCADGFKRALIYEYLPNGSLQKFINSPDNKKNFLGWKKLHEIALGIAKGIEYLHQGCDQRILHFDIKPQNVLLDHNFIPKISDFGLAKLCSRDQSIVSMTAARGTLGYIAPEVFSRNFGNVSYKSDVYSYGMMLLETIGGRKITEDLEENSSHVYYPEWIYNLIDDEEEMKIHIDDEGDEKIARKMAIVGLWCIQWHAMDRPSMQMVVQMLEENIDKTPIPPNPFDSQSRQPRRTDATATTRQVTHNLDVIQEID* 613
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mtr1g0964 612 Pfam Protein kinase domain 301 566 IPR000719 GO:0004672|GO:0005524|GO:0006468
Mtr1g0964 612 ProSitePatterns Protein kinases ATP-binding region signature. 303 325 IPR017441 GO:0005524
Mtr1g0964 612 MobiDBLite consensus disorder prediction 574 605 - -
Mtr1g0964 612 PANTHER RECEPTOR-LIKE KINASE 34 611 - -
Mtr1g0964 612 MobiDBLite consensus disorder prediction 578 605 - -
Mtr1g0964 612 Gene3D Transferase(Phosphotransferase) domain 1 372 578 - -
Mtr1g0964 612 Pfam Wall-associated receptor kinase galacturonan-binding 27 93 IPR025287 GO:0030247
Mtr1g0964 612 ProSiteProfiles Protein kinase domain profile. 297 572 IPR000719 GO:0004672|GO:0005524|GO:0006468
Mtr1g0964 612 ProSitePatterns Serine/Threonine protein kinases active-site signature. 418 430 IPR008271 GO:0004672|GO:0006468
Mtr1g0964 612 SUPERFAMILY Protein kinase-like (PK-like) 280 569 IPR011009 -
Mtr1g0964 612 SMART serkin_6 297 568 IPR000719 GO:0004672|GO:0005524|GO:0006468
Mtr1g0964 612 PANTHER RUST RESISTANCE KINASE LR10-RELATED 34 611 IPR045874 GO:0004672
Mtr1g0964 612 Gene3D Phosphorylase Kinase; domain 1 270 371 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mtr1g0964 Mtr-Chr1 11122180 11125074 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mtr1g0964 3 585 Receptor kinase-like Gene Family AT1G66910 36.997 7.48e-119 366
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRK10L-2 Mtr1g0964 Pkinase 2.6e-48 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mtr1g0964 - - mtr:MTR_1g031540 1212.21