Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mtr1g0963 ATGGATACTTGTTATTATATCGGAAAACAAAAAATGCAATCCTTAACCTTTGTTGTGGTGTTACTAATACTGATATTCTCGTACAATATTGCAGATGGTGATGAACAACAAGAGTCATGTTCAAGAAGGTGCGGTGTTCATAACATCAGCCACCCTTTCCGATTGAAAGACAGTCCCAAAAAATGTGGTGACAATAGGTACAACCTATCATGTGAGGACAACAATCAATTGATTTTGTACCATGGTTCATTTGGAAAATACTATGTACAATCAATTAATTACAACAACTTTACCATCCAACTATCGTATTTCAATATTCTTTCTAATAACTCCATCCCTCCTAGTGATTTCAGTCCTTTTTTCACCTCAAATATCTACGTACCTTATCTAGAAAAAAACAATTCGTTGAGCAATAGATTGACGAAACTTATGTTGCATGTGAGCTGTCCGAACCAGGCTGGTTACATATACAGAGATAACTGTAGGAATAGTAGTTTGTATTCACGGTACGAGAATTCTTTCTATGTTGATGGCTACTTCAAAACTCTTTCGGAGTTGGGGTTGAGAGATGGATGTCGTATAGAGCTTATGTTTCTCACATCTTGGTCTCCTCAAGATGGCAACAACAATAACATTTCTTGCACGGACATCAACCGTATGATGTCTTATGGATTTGAAGTCTCTTGGCTCAATAGTCTTTGTAAAGATGATTGGCATGCAGAGTTTGATCAAAATAACCACCTTCATTGTCGTCGTCCAGGTGATGACCGGTATTTTGAGGCCGTAAGAGTTGGACCTATCAAGACGTATTACCTAGAACGGAAATTATGGGTTGCGAGGGGCAAAGTTACCTTGATTTACATAGGTGAGTTGATTGTTTTGTTCAGCCTTTTTAAATTTGTTCTTGGAGCACTATGTATGATTGTATTATTAATCTACAAATGGCGACGGAAGCATCTATCTATGTATGACGGCGTCGAAGATTTTCTTAGTAGTGACAATAGCATCATCCCTATAAGGTACTCTTACAGAGATATAAAAAAGATAACCGAACAATTCAAGACAAAACTAGGCAATGGAGGGTATGGATCTGTTTTCAAAGGACAACTTCGAAGTGGTCGTCTTGTAGCAGTCAAATTATTGGACAAAGCCAAGTCCAGTGATCAAGATTTTGTCAATGAAGTTGCTACCATTGGTAGGATTCACCATGTTAATGTGGTGCAGCTCATTGGTTTTTGTGTGGAAGGTTCAAAACGTGTTCTTATATATGAATTCATGCCAAATGGATCACTTGAAAAATACATATTTTCTCATACAAAAGAGAATTATTCCTTAAGTTGCGAACAATTGTATTCAATTTCTCTTGGAGTGGCTCGTGGCATTGAGTACTTGCATCATGGATGCAATATGAAAATTCTACACTTTGATATAAAGCCTCATAACATTCTTCTTGATGAAAATTTCAATCCAAAAGTTTCTGATTTTGGACTAGCTAGACTTTGTCCTACAGATAAAAGCATTGTGTCATTAACTGCAGCAAGAGGAACCATTGGATATATGGCCCCTGAACTATTCTACAGAAATGTTGGCACAATATCTTACAAAGCTGATGTATATAGTTTTGGGATGTTGTTGATGGAGATGGCAAGTAGAAGGAAGAACTTGAATGCATTGGCTGAGCAATCCAGCCAAATTTATTTTCCTTTTTGGATTTATGATAAATTTCATGATGGAAGTGAAGTAACAATTGAGAACGACACAGATCAGGAAATGAAGCTAGCAAAGAAAATGATGATTGTGGCGTTATGGTGTATACAGACAAAACCTGATGATCGTCCTTCAATGGATAAAGTTTTGGAGATGCTTGAAGAAGAAGATGGAGACTTGCAGATTCCTAATAAGCCTTACTTTTGTCCACAAGATTCACCAATAGCGGATGTTTACAGTAGCAACTCATGGACTTCCGATGGTACATCAGTTAGTGGTTCCAAGGGACCAAACTGA 2004 0.3733 MDTCYYIGKQKMQSLTFVVVLLILIFSYNIADGDEQQESCSRRCGVHNISHPFRLKDSPKKCGDNRYNLSCEDNNQLILYHGSFGKYYVQSINYNNFTIQLSYFNILSNNSIPPSDFSPFFTSNIYVPYLEKNNSLSNRLTKLMLHVSCPNQAGYIYRDNCRNSSLYSRYENSFYVDGYFKTLSELGLRDGCRIELMFLTSWSPQDGNNNNISCTDINRMMSYGFEVSWLNSLCKDDWHAEFDQNNHLHCRRPGDDRYFEAVRVGPIKTYYLERKLWVARGKVTLIYIGELIVLFSLFKFVLGALCMIVLLIYKWRRKHLSMYDGVEDFLSSDNSIIPIRYSYRDIKKITEQFKTKLGNGGYGSVFKGQLRSGRLVAVKLLDKAKSSDQDFVNEVATIGRIHHVNVVQLIGFCVEGSKRVLIYEFMPNGSLEKYIFSHTKENYSLSCEQLYSISLGVARGIEYLHHGCNMKILHFDIKPHNILLDENFNPKVSDFGLARLCPTDKSIVSLTAARGTIGYMAPELFYRNVGTISYKADVYSFGMLLMEMASRRKNLNALAEQSSQIYFPFWIYDKFHDGSEVTIENDTDQEMKLAKKMMIVALWCIQTKPDDRPSMDKVLEMLEEEDGDLQIPNKPYFCPQDSPIADVYSSNSWTSDGTSVSGSKGPN* 668
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mtr1g0963 667 ProSitePatterns Serine/Threonine protein kinases active-site signature. 472 484 IPR008271 GO:0004672|GO:0006468
Mtr1g0963 667 Pfam Wall-associated receptor kinase galacturonan-binding 40 101 IPR025287 GO:0030247
Mtr1g0963 667 PANTHER RUST RESISTANCE KINASE LR10-RELATED 286 645 IPR045874 GO:0004672
Mtr1g0963 667 PANTHER RUST RESISTANCE KINASE LR10-RELATED 14 237 IPR045874 GO:0004672
Mtr1g0963 667 Pfam Protein kinase domain 354 620 IPR000719 GO:0004672|GO:0005524|GO:0006468
Mtr1g0963 667 Gene3D Phosphorylase Kinase; domain 1 324 425 - -
Mtr1g0963 667 ProSitePatterns Protein kinases ATP-binding region signature. 357 379 IPR017441 GO:0005524
Mtr1g0963 667 Gene3D Transferase(Phosphotransferase) domain 1 426 631 - -
Mtr1g0963 667 SMART serkin_6 351 622 IPR000719 GO:0004672|GO:0005524|GO:0006468
Mtr1g0963 667 MobiDBLite consensus disorder prediction 648 667 - -
Mtr1g0963 667 SUPERFAMILY Protein kinase-like (PK-like) 331 623 IPR011009 -
Mtr1g0963 667 ProSiteProfiles Protein kinase domain profile. 351 637 IPR000719 GO:0004672|GO:0005524|GO:0006468
Mtr1g0963 667 PANTHER STRESS-INDUCED RECEPTOR-LIKE KINASE 286 645 - -
Mtr1g0963 667 PANTHER STRESS-INDUCED RECEPTOR-LIKE KINASE 14 237 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mtr1g0963 Mtr-Chr1 11108254 11117810 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mtr1g0963 5 656 Receptor kinase-like Gene Family AT1G66910 33.480 3.06e-105 332
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRK10L-2 Mtr1g0963 Pkinase 2.5e-49 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mtr1g0963 - - mtr:MTR_1g031450 768.074