Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mtr1g0961 ATGAGTTTTTGCCACTTCTCAGAAAATAAAAAAATGTCATTCTTTGCAACATTGAATCTTCTGGTGGTGTTGGTGATGTTGCTTATACTTCCATACAACAACGTGCATGGAGATGAACAACAAGATTCATGCTCTACAAGGTGCGGTGACCATAACATAAGCCACCCTTTCCGATTGAAAGACAGTCCCGAAAACTGTGGTGACAAAAGGTACATCTTATCATGTGAGGACAACAACCAATTGATTTTGTACTATGGTTCATTTGGAAAATACTATGTACAATCAATTAATTACAATAACTTCACTATACGTCTATTGGATTTCAATAGTCATGGTTACTCTAATTATTCCCTCCCACCTCATCCACTAGGCTTCTATAGTTTCGATTCAAGGACCATCAATCCAATAGCCTTGCCATATAGAGTGTTTGGGGATCACTATATAGATTTGTTCAAGTCTATGTTATATGTGACATGTCCCAAACATGTCCAATATTCTTCAGGTATTTACTTTGATGCTGCTTGTATGAACATTAGTAATTCTTATGAACAGCAGAAAGGGAACTATATTGTGTTTGGGGACAAATCTCTTTTGGAATTGGCTCTGGGAGATGAGTGTCGTATAGAGTTGATGTTTCTTACATCTTGGGATTTTAAGCATGGTGGAAACAACAACATTTCTTGTACGGATATTCATCGTATGATGTTTTATGGATTTGAACTTTCATGGCTCAATAGTCTTTGTAAACATGGTTGGTATTCAGACATCCTCGATTACAATAACCAACGTCGTGCACCTTCAGAAACTTGGAGTTTACAGGCTCTGGTAACCGTATCTATCTTGATGTACATAGGTATATTGCTTGGTTTTCTTTCCGGTGTTAAATTTGTTCTTGGAGTACCTATTGTATTATTAATCTACAAATGGCGACAAAAACATTTATCTGTGTATGATGGCATCGAAGATTTTCTACGCAGTGATAATAGCATCATGCCTATAAGGTACTCTTACAAAGACATAAAAAAGATAACAGAACAATTCAAGATAAAACTAGGCAACGGAGGTTATGGAACTGTTTTTAAAGGAAAACTTCGAAGTGATCGTCTTGTAGCGGTCAAATTATTGGACAAAGCCAAGACCAACGGTCAAGATTTTGTCAATGAAGTTACTACCATTGGTAGGATTCACCATGTCAATGTGGTACAACTCATTGGATTTTGTGTGGAGGGTTCAAAACGTGCTCTTATATATGAATTCATGCCAAATGGATCACTGGAAAAATACATATTTTCTCTTATTGAAGAGAGTAACTCTTTGAGTTGTAAAAAATTGTATGCCATTTCTCTTGGTGTAGCTCGAGGTATTGCATACTTGCATAATGGATGCAATATGAAAATTCTACACTTTGATATAAAGCCTCATAACATCCTTCTTGATGAAAATTTCAATCCAAAAGTTTCTGATTTTGGATTAGCTAGGGTTTCTCCTACAGACAAAAGCATTGTGTCCTTAACTGCAGCAAGAGGAACCATTGGATACATGGCCCCTGAACTATTCTACAGAAATGTCGGCACAATATCTCACAAAGCTGATGTCTATAGCTTTGGGATGTTGTTGATGGAGATGGCAAGTAGAAGGAAGAACTTGAATCCATTGGCTGAGCAATCTTGCCAAATTTATTTCCCTTTTTGGATTTATGGTCAGTTACATGATGGAAGTGAAGTAACAATTGAGAATGACACAGATGAAGAAATGAAATTGGCAAAGAAAATGATGATTGTGGCTTTATGGTGTATACAGACAAAACCAGGTGATCGTCCTTCAATGGATAAAGTGATTGAGATGCTTGAAGAAGAAGATGGGGATTTGCAAATGCCTAATAAGCCTTACCTTTATCCACAAGATCTACCAGCTGAGGATTTTAGAGATGGTAATACTAGAAGTTCTTGGTCTTCCTCTGATACATCAATAAATGATTTCATGGAACCAACCTGA 1995 0.3674 MSFCHFSENKKMSFFATLNLLVVLVMLLILPYNNVHGDEQQDSCSTRCGDHNISHPFRLKDSPENCGDKRYILSCEDNNQLILYYGSFGKYYVQSINYNNFTIRLLDFNSHGYSNYSLPPHPLGFYSFDSRTINPIALPYRVFGDHYIDLFKSMLYVTCPKHVQYSSGIYFDAACMNISNSYEQQKGNYIVFGDKSLLELALGDECRIELMFLTSWDFKHGGNNNISCTDIHRMMFYGFELSWLNSLCKHGWYSDILDYNNQRRAPSETWSLQALVTVSILMYIGILLGFLSGVKFVLGVPIVLLIYKWRQKHLSVYDGIEDFLRSDNSIMPIRYSYKDIKKITEQFKIKLGNGGYGTVFKGKLRSDRLVAVKLLDKAKTNGQDFVNEVTTIGRIHHVNVVQLIGFCVEGSKRALIYEFMPNGSLEKYIFSLIEESNSLSCKKLYAISLGVARGIAYLHNGCNMKILHFDIKPHNILLDENFNPKVSDFGLARVSPTDKSIVSLTAARGTIGYMAPELFYRNVGTISHKADVYSFGMLLMEMASRRKNLNPLAEQSCQIYFPFWIYGQLHDGSEVTIENDTDEEMKLAKKMMIVALWCIQTKPGDRPSMDKVIEMLEEEDGDLQMPNKPYLYPQDLPAEDFRDGNTRSSWSSSDTSINDFMEPT* 665
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mtr1g0961 664 SUPERFAMILY Protein kinase-like (PK-like) 326 617 IPR011009 -
Mtr1g0961 664 ProSitePatterns Protein kinases ATP-binding region signature. 351 373 IPR017441 GO:0005524
Mtr1g0961 664 PANTHER STRESS-INDUCED RECEPTOR-LIKE KINASE 18 250 - -
Mtr1g0961 664 PANTHER STRESS-INDUCED RECEPTOR-LIKE KINASE 290 641 - -
Mtr1g0961 664 SMART serkin_6 345 616 IPR000719 GO:0004672|GO:0005524|GO:0006468
Mtr1g0961 664 Pfam Protein kinase domain 349 614 IPR000719 GO:0004672|GO:0005524|GO:0006468
Mtr1g0961 664 PANTHER RUST RESISTANCE KINASE LR10-RELATED 18 250 IPR045874 GO:0004672
Mtr1g0961 664 PANTHER RUST RESISTANCE KINASE LR10-RELATED 290 641 IPR045874 GO:0004672
Mtr1g0961 664 ProSiteProfiles Protein kinase domain profile. 345 631 IPR000719 GO:0004672|GO:0005524|GO:0006468
Mtr1g0961 664 Pfam Wall-associated receptor kinase galacturonan-binding 44 107 IPR025287 GO:0030247
Mtr1g0961 664 Gene3D Phosphorylase Kinase; domain 1 324 419 - -
Mtr1g0961 664 Gene3D Transferase(Phosphotransferase) domain 1 420 627 - -
Mtr1g0961 664 MobiDBLite consensus disorder prediction 622 664 - -
Mtr1g0961 664 MobiDBLite consensus disorder prediction 644 664 - -
Mtr1g0961 664 ProSitePatterns Serine/Threonine protein kinases active-site signature. 466 478 IPR008271 GO:0004672|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mtr1g0961 Mtr-Chr1 11100508 11103884 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mtr1g0961 12 632 Receptor kinase-like Gene Family AT5G38260 36.265 1.88e-106 334
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRK10L-2 Mtr1g0961 Pkinase 5.5e-47 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mtr1g0961 - - aip:107605930 716.457