Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mtr1g0956 ATGGCATTCTTGTTGTTCATGTTTTACATTGTTGTTGGAACAACAACAGCCACGCCCACAGAAAATAACTGTCCAGAAGATTTAACATGTGGAAATCAAGTTATCAAATTTCCTTTTCAAATCAAAAACCACAATCCAAATCCATCTTTCTGCGGCTATCCAGGTTTTGATTTATTTTGTTCATCAAATAAGGAAACTATGATTGAACTCCCTCATAAAGTGAAACTCAAGGTCAAGAACATCGACTACACAAACCAAACTATTGAACTATCCGATCCACAAGGTTGCCTATACATACAGTTCCACAACCTTAATCTTTCATCTTCTCATTTCAAGCAAGTATCCGATACACGGTACTTCTACGATAAAGTTGATAGCTATCACTTTTTTAATTGTTCACTTTTGATTAGAGATGATGATATGGATTCCTATTTGGTTCCGTGTCTAAGCACTTCAACCTCTCAAACATACGCTATCCCTGCTTATGAACCTATCAAATTCTTTCCTCTCACGTTTTGCACCAAAATGTATAATGTTTCAGTAATGGGCCCTTCATATTCCGGAACTATTCCAAAGAAAAATTTTCTTCGTTTGAAGTGGTCTGAGCCTAATTGTAAACACTGTGAATCAGAAGGAAAAAGATGTGACTGGAAGAATACTACTAGTAATAGTACCAACAAGGAAGTATATTGTTTTGCCAAAAACAACAATAAAGGTTCTTCAACTACCCTAGTCAACACAGGATCAATTTTAGGTTCGTTATTTTTTGTCTTGTTGACTGGTGCAATCTACCATATTTATGACTCTTACATACAAAAGAAAGAAAAACAAGCCATTATAGAAAAGTTTTTAGAAGATTATAGAGCTCTTAAGCCCACAAGATACTCATATGAAGAAATTAAAAGAATCACAAATAATTTTGGCGACAAGTTAGGACAAGGTGCCTATGGAACTGTATATAGAGGAAGCATTTCAAAAGAAATCATTGTTGCTGTGAAGATACTAAATGTTTCACAAGGAAACGGGCAAGATTTCCTCAATGAAGTTGGTACAATGGGTAGAATCCATCATGTTAATATTGTTAGATTGGTCGGTTTCTGTGCTGATGGATTTAAAAGAGCTCTTATTTATGAATTTTTACCAAATGGTTCGCTCCAGAAGTTCATTAATTCACCAGAAAACAAGAAAAACTTCCTTGGTTGGAAAAAGTTGCATGAAATTGCTTTAGGTATAGCTAAAGGAGTTGAGTATCTTCATCAAGGTTGTGACCAACGCATCGTCCATTTCGATATCAAACCACAAAATGTGTTACTTGACCATAACTTTATTCCAAAGATATCTGACTTTGGTCTAGCTAAATTATGTTCAAGGGACCAAAGCATAGTGTCAATGACAGCAGCTAGAGGAACTTTGGGCTACATTGCTCCAGAAGTTTTCTCAAGGAACTTTGGAAATGTGTCTTACAAATCAGATGTTTATAGTTATGGAATGATGTTGCTTGAAACAATAGGAGGGAAGAAGATAACAGAGGACTTAGAGGAAAACAGTAGTCATGTTTACTATCCGGAGTGGATTTATAATCTTATAGATGATCAAGAGGAAATGAGAATACAGGTTGACGATGAAGGGGATGAAAAAATTGCAAGGAAAATGGCCATTGTGGGATTATGGTGCATTCAGTGGCATGCTATGCATCGACCAACAATGCAAATGGTGGTTCAGATGTTGGAGGGAGATGTCGACAAAACTCCAATACCTCCAAATCCTTTTGCTTCTCAATCTAGACAACCTAGGAGAAATGGCGGAGCTAAAATTACTAGACAACTAACTCAAGAGTTGGATGTAATTCAAGAGTTAGATTGA 1863 0.3612 MAFLLFMFYIVVGTTTATPTENNCPEDLTCGNQVIKFPFQIKNHNPNPSFCGYPGFDLFCSSNKETMIELPHKVKLKVKNIDYTNQTIELSDPQGCLYIQFHNLNLSSSHFKQVSDTRYFYDKVDSYHFFNCSLLIRDDDMDSYLVPCLSTSTSQTYAIPAYEPIKFFPLTFCTKMYNVSVMGPSYSGTIPKKNFLRLKWSEPNCKHCESEGKRCDWKNTTSNSTNKEVYCFAKNNNKGSSTTLVNTGSILGSLFFVLLTGAIYHIYDSYIQKKEKQAIIEKFLEDYRALKPTRYSYEEIKRITNNFGDKLGQGAYGTVYRGSISKEIIVAVKILNVSQGNGQDFLNEVGTMGRIHHVNIVRLVGFCADGFKRALIYEFLPNGSLQKFINSPENKKNFLGWKKLHEIALGIAKGVEYLHQGCDQRIVHFDIKPQNVLLDHNFIPKISDFGLAKLCSRDQSIVSMTAARGTLGYIAPEVFSRNFGNVSYKSDVYSYGMMLLETIGGKKITEDLEENSSHVYYPEWIYNLIDDQEEMRIQVDDEGDEKIARKMAIVGLWCIQWHAMHRPTMQMVVQMLEGDVDKTPIPPNPFASQSRQPRRNGGAKITRQLTQELDVIQELD* 621
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mtr1g0956 620 ProSitePatterns Protein kinases ATP-binding region signature. 311 333 IPR017441 GO:0005524
Mtr1g0956 620 Pfam Protein kinase domain 308 574 IPR000719 GO:0004672|GO:0005524|GO:0006468
Mtr1g0956 620 Gene3D Phosphorylase Kinase; domain 1 279 379 - -
Mtr1g0956 620 MobiDBLite consensus disorder prediction 583 604 - -
Mtr1g0956 620 PANTHER RUST RESISTANCE KINASE LR10-RELATED 20 619 IPR045874 GO:0004672
Mtr1g0956 620 ProSiteProfiles Protein kinase domain profile. 305 591 IPR000719 GO:0004672|GO:0005524|GO:0006468
Mtr1g0956 620 SMART serkin_6 305 576 IPR000719 GO:0004672|GO:0005524|GO:0006468
Mtr1g0956 620 Gene3D Transferase(Phosphotransferase) domain 1 380 583 - -
Mtr1g0956 620 Pfam Wall-associated receptor kinase galacturonan-binding 24 92 IPR025287 GO:0030247
Mtr1g0956 620 PANTHER RECEPTOR-LIKE KINASE 20 619 - -
Mtr1g0956 620 SUPERFAMILY Protein kinase-like (PK-like) 289 577 IPR011009 -
Mtr1g0956 620 ProSitePatterns Serine/Threonine protein kinases active-site signature. 426 438 IPR008271 GO:0004672|GO:0006468
Mtr1g0956 620 MobiDBLite consensus disorder prediction 587 604 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mtr1g0956 Mtr-Chr1 11030791 11033460 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mtr1g0956 2 593 Receptor kinase-like Gene Family AT1G66910 36.646 9.54e-114 353
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRK10L-2 Mtr1g0956 Pkinase 7.1e-49 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mtr1g0956 - - mtr:MTR_1g031540 962.214
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Mtr1g0956 1 11030791 11033460 Mtr1g0956 1 11030791 11033460 ECH