Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mtr1g0955 ATGCCATCCTTAAACTCTGCTGCAGCAGCGGTAACCCTTGCGATGCTGATAGTAACATTCAGGTACAGTGTGTATGGTGATGAACACCAAGAGTCATGTTCTCGATGGTGCGGTGTTCATAACATCAGGTCTCCTTTCCGCTTGAAAGACAGTCCTAAAAAGTGTGGTGACAAAAGATACATCTTATCATGTGAGGACAACAACCAGTTGATTTTGTACTATGAATTTGGAAAAAACCATGGTAAATTTTATGTACAATCAATTAATTACAACAACTACACTATACGACTATTGGATGTCAATTTTGGTTACTCTAATTTTACCCTCCCTCCCCATTCACTAGGCCTCTATAATTTCACTTACACATATTCCATAAGCTTGCCGTACGAAATGTATGTGTACAATATATTATTGGCAAAGCCTGTGTTATATATGAGATGTCCGAATCATGTCCAATATTCTTCTGGTATTTACTTTGCTTCTCCGGCCTGTATGAACATTAGTACATATGAGCAACCAGGGAATTCGTTCTACGTCAATTATATTGGAGAAAACGAAACTTTTTCGGATTCGGGGCTGGCAGACGGTTGTGGTATCGTGCTTATGTATCTCACATCTTTGGATATTCAAAATAACAACAACCACAACAAAAACAACAACATTTCATGCACAGACATCCGTCGTGAGATCTTTTATGGATTTGAACTTTCTTGGCTCAACAGTTTTTGTAAAGATGGATGGTATGCAGACCTCGATGACAATAACACCTATGTCTGTGTAGAAGACCTCCATTTGAACTTTGGAGAATACTCGGCGCTTCAAAAGGTTGCTTGGAATCTCGTTTATATCTCAATTCTCATAGCTTTGCTCGTCGGTTTTAAATTTGTTCTTGGAGCGCCATGTATCATTGCATTATTAATCTACAAATGGAGACGGAAACATTTCTCTATGTATGACGGCGTCGAAGACTTTCTACGAAGTGACAATAACATCATGCCTATAAGGTACTCTTACAAAGACATAAAAAAGATAACACACCAGTTCAAAACAAAATTAGGCAATGGAGGTTATGGATCTGTTTTCAAAGGACAACTTCAAAGTGGTCGTCTTGTAGCAGTTAAATTATTGGACAAAGCCAAGTCCAACGGTCAAGATTTTATCAATGAAGTTGTCACCATCGGTAGGATTCACCATGTTAATGTGGCACACCTTATTGGTTTTTGTGTGGAGGGTTCAAAACGTGTTCTTATATATGAATTCATGCCAAATGGATCACTCGAAAAATACATATTTTCTCATACAAAAGAGAATTATTCCTTAAGTTGCGAACAATTGTATTCAATTTCTCTTGGAGTGGCTCGTGGCATTGAGTACTTGCACAATGGATGCAATATGAAAATTCTACACTTTGATATAAAGCCTCATAACATCCTTCTTGATGAAAATTTCAATCCAAAAGTTTCTGATTTTGGACTAGCCAGGCTTTCTCCTACAGATAAAAGCATTGTGTCATTAACTGCAGCAAGAGGAACCATCGGATATATGGCCCCTGAATTATTCTATAGAAATGTCGGCACAATATCTCACAAAGCTGATGTATATAGCTTTGGGATGTTGTTAATGGAGATGGCAAGCAGAAGGAAGAATTTGAATGCATTGGCTGATCAATCTAGTGAAATTTATTTCCCTTTTTGGATTTATGATCGATTACATGATGGAAGGGAAGTAACTATTGAAAATGACACAGATCAGGAAATGAAATTGGCAAAGAAAATGATGATTGTAGCTTTGTGGTGTATACAAACAAAACCAGAGGATCGTCCTTCAATGGAAAAAGTTTTGGAGATGCTTGAAGAAGAAGATGGAGACTTGCAAATTCCTAATAAGCCTTATTTTTGTCCACAAGATCCACCAACAGCAGATGTTGGAGATGATAATTGTAGCAATTCATGGACTTCTTATGGTACATCAGTTAGTTATCCCAAGGGACCAACCTGA 1998 0.3764 MPSLNSAAAAVTLAMLIVTFRYSVYGDEHQESCSRWCGVHNIRSPFRLKDSPKKCGDKRYILSCEDNNQLILYYEFGKNHGKFYVQSINYNNYTIRLLDVNFGYSNFTLPPHSLGLYNFTYTYSISLPYEMYVYNILLAKPVLYMRCPNHVQYSSGIYFASPACMNISTYEQPGNSFYVNYIGENETFSDSGLADGCGIVLMYLTSLDIQNNNNHNKNNNISCTDIRREIFYGFELSWLNSFCKDGWYADLDDNNTYVCVEDLHLNFGEYSALQKVAWNLVYISILIALLVGFKFVLGAPCIIALLIYKWRRKHFSMYDGVEDFLRSDNNIMPIRYSYKDIKKITHQFKTKLGNGGYGSVFKGQLQSGRLVAVKLLDKAKSNGQDFINEVVTIGRIHHVNVAHLIGFCVEGSKRVLIYEFMPNGSLEKYIFSHTKENYSLSCEQLYSISLGVARGIEYLHNGCNMKILHFDIKPHNILLDENFNPKVSDFGLARLSPTDKSIVSLTAARGTIGYMAPELFYRNVGTISHKADVYSFGMLLMEMASRRKNLNALADQSSEIYFPFWIYDRLHDGREVTIENDTDQEMKLAKKMMIVALWCIQTKPEDRPSMEKVLEMLEEEDGDLQIPNKPYFCPQDPPTADVGDDNCSNSWTSYGTSVSYPKGPT* 666
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mtr1g0955 665 MobiDBLite consensus disorder prediction 642 665 - -
Mtr1g0955 665 Gene3D Transferase(Phosphotransferase) domain 1 421 626 - -
Mtr1g0955 665 ProSitePatterns Serine/Threonine protein kinases active-site signature. 467 479 IPR008271 GO:0004672|GO:0006468
Mtr1g0955 665 PANTHER RUST RESISTANCE KINASE LR10-RELATED 15 245 IPR045874 GO:0004672
Mtr1g0955 665 PANTHER RUST RESISTANCE KINASE LR10-RELATED 285 640 IPR045874 GO:0004672
Mtr1g0955 665 Pfam Protein kinase domain 348 615 IPR000719 GO:0004672|GO:0005524|GO:0006468
Mtr1g0955 665 SMART serkin_6 346 617 IPR000719 GO:0004672|GO:0005524|GO:0006468
Mtr1g0955 665 SUPERFAMILY Protein kinase-like (PK-like) 329 618 IPR011009 -
Mtr1g0955 665 Gene3D Phosphorylase Kinase; domain 1 325 420 - -
Mtr1g0955 665 Pfam Wall-associated receptor kinase galacturonan-binding 33 99 IPR025287 GO:0030247
Mtr1g0955 665 ProSiteProfiles Protein kinase domain profile. 346 632 IPR000719 GO:0004672|GO:0005524|GO:0006468
Mtr1g0955 665 ProSitePatterns Protein kinases ATP-binding region signature. 352 374 IPR017441 GO:0005524
Mtr1g0955 665 PANTHER STRESS-INDUCED RECEPTOR-LIKE KINASE 285 640 - -
Mtr1g0955 665 PANTHER STRESS-INDUCED RECEPTOR-LIKE KINASE 15 245 - -
Mtr1g0955 665 MobiDBLite consensus disorder prediction 625 665 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mtr1g0955 Mtr-Chr1 11016115 11024429 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mtr1g0955 15 630 Receptor kinase-like Gene Family AT5G38260 36.006 1.75e-102 324
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRK10L-2 Mtr1g0955 Pkinase 8.9e-48 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mtr1g0955 - - aip:107607706 729.939