Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mtr1g0954 ATGTACGAGGGCATCGAAGATTTTCTGCACAGTAACAATGACATCATGCCTATAAGATACTCATACAAAGACATCAAAAAAATAACTGAGCAATTCAAGACAAAATTAGGGAATGGAGGCTATGGCTCTGTCTACAAAGGACAACTTCGAAGTGGTCGTCTTGCAGCGGTGAAATTATTGGACAAAGCCAAATCCAATGGTCAAGATTTTATCAATGAAGTTGCTACCATCGGTAGGATTCACCACGTTAATGTGGTACAACTTATTGGATTTTGTGTGGATGGGTCAAAGCGTGCTCTAATATATGAATTCATGCCAAATGGGTCACTTGAAAAATACATATTTTCTCATACCAAGGATTGTTTTTCCTTGAGTTGTGAAAAGTTGTATGCCATTTCTGTTGAAGTGGCTCGAGGCATTGCGTACTTGCATAACGGATGCAATGTGAAAATTCTACACTTTGATATAAAGCCTCATAACATTCTTCTTGATGAAAGTTTCAATCCAAAAGTTTCTGATTTTGGACTTGCCAGACTTTCTCCTACAGATAAAAGCATTGTGTCATTAACTGCAGCAAGAGGAACCATTGGATATGCCCCTGAACTTTTCTACAGAAATGTTGGAATGATATCTTACAAAGCTGATGTCTATAGCTTTGGGATGTTGTTAATGGAGATGGCAAGTAGAAGGAAGAACTTGAATGCATTGGCCGAACAATCTAGCCAAATTTATTTCCCTTTTTGGATTTATGATCGATTACATGATGGAAGGGAAGTAACTATTGAAAATGACACAGATCAGGAAATGAAATTGGCAAAGAAAATGATGACCGTGGCTTTGTGGTGTATACAAACAAAACCCGAGGATCGTCCTTCAATGGATAAAGTTTTGGAGATGCTTGAAAAAGAAGATGGGGACTTACAAATTCCTAATAAGCCTTACTTTTGTCCACAAGATCCACCAACAGCAGACGTTGGAGATGATAATAATAGCAACTCATGGACTTCCTATGGTACATCAATTAGTGATCCCAAGGGACCAACCTAA 1047 0.382 MYEGIEDFLHSNNDIMPIRYSYKDIKKITEQFKTKLGNGGYGSVYKGQLRSGRLAAVKLLDKAKSNGQDFINEVATIGRIHHVNVVQLIGFCVDGSKRALIYEFMPNGSLEKYIFSHTKDCFSLSCEKLYAISVEVARGIAYLHNGCNVKILHFDIKPHNILLDESFNPKVSDFGLARLSPTDKSIVSLTAARGTIGYAPELFYRNVGMISYKADVYSFGMLLMEMASRRKNLNALAEQSSQIYFPFWIYDRLHDGREVTIENDTDQEMKLAKKMMTVALWCIQTKPEDRPSMDKVLEMLEKEDGDLQIPNKPYFCPQDPPTADVGDDNNSNSWTSYGTSISDPKGPT* 349
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mtr1g0954 348 ProSiteProfiles Protein kinase domain profile. 30 315 IPR000719 GO:0004672|GO:0005524|GO:0006468
Mtr1g0954 348 ProSitePatterns Protein kinases ATP-binding region signature. 36 58 IPR017441 GO:0005524
Mtr1g0954 348 PANTHER INSENSITIVE 1-ASSOCIATED RECEPTOR KINASE 1, PUTATIVE-RELATED 1 316 - -
Mtr1g0954 348 PANTHER RUST RESISTANCE KINASE LR10-RELATED 1 316 IPR045874 GO:0004672
Mtr1g0954 348 Gene3D Transferase(Phosphotransferase) domain 1 105 313 - -
Mtr1g0954 348 SMART serkin_6 30 300 IPR000719 GO:0004672|GO:0005524|GO:0006468
Mtr1g0954 348 MobiDBLite consensus disorder prediction 324 348 - -
Mtr1g0954 348 MobiDBLite consensus disorder prediction 308 348 - -
Mtr1g0954 348 Pfam Protein kinase domain 32 298 IPR000719 GO:0004672|GO:0005524|GO:0006468
Mtr1g0954 348 ProSitePatterns Serine/Threonine protein kinases active-site signature. 151 163 IPR008271 GO:0004672|GO:0006468
Mtr1g0954 348 SUPERFAMILY Protein kinase-like (PK-like) 10 301 IPR011009 -
Mtr1g0954 348 Gene3D Phosphorylase Kinase; domain 1 9 104 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mtr1g0954 Mtr-Chr1 11003027 11006534 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mtr1g0954 19 331 Receptor kinase-like Gene Family AT5G38280 49.068 9.99e-102 312
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRK10L-2 Mtr1g0954 Pkinase 3.3e-45 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mtr1g0954 - - mtr:MTR_1g031200 712.22
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Mtr1g0954 1 11003027 11006534 Mtr1g0954 1 11003027 11006534 ECH