Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mtr1g0940 ATGGCTGAACAAATTCCATACGGTGTTGCTCAAAGCCTCATTAACGGGTTGGCTTCTGTTGCCTTACGTGAATTTGGACGGATTAATAATGTGAAAGATGAATTAGAAAGCCTTACGAAGACAGTTGAATCCATCAGAGCTGTGCTCCTTGATGCTGAGAACAAACAAGAGAAAAGTCTTTGTGTACAAAACTGGGTTACAAGGCTCAAAGATGTGCTTGTTGCTGCAGATGATTTGATAGATGAATTTCTTATTGAAGATATGATACGCAAAAGGGATGAAGCTCATAAGAACAAAGTAACAAAGGTACTTCATTCTTTCTCTTTAAGCAAAGCTGTTTTTTGTCGTAAAATGGCTCTAGAGATTGAAAAAATACAAAAAGGTTTTAATGATGTGGTGAAAGATATGTCTGGGTTGAATCTTAACTCAAATGTTGTAGTGGTTGAGAAAACTAACGATGTAAGGAGGGAAACTAGTTCTTTTGTGTTAGAATCAAATATCATTGGAAGAGAATATGATAAAAAGAAAATTATAAGTTTGTTGATGCAATCACATGAAAATCAGAATGTCTCCTTGGTTGCTATTGTTGGTATTGGTGGTTTAGGGAAGACGGCTCTTGCTCAATTGGTATACAACGATAGAGAAGTGCAAGATTTGTTTGAGAAGAGTATGTGGGTATGTGTCTCTGATAACTTTGACGTCAAAACTATTCTGAAGAACATGTTGGAGTCATTAACCAAGAACAAAATTGATGACACATTATCATTGGACAACTTGCAAAATATGCTTCGTGAAAATTTAACTGGTAAGAGATACTTGTTACTTCTGGATGACGTTTGGAATAAGAGTTTTGAAAAGTGGGATCAGTTAATGACTTATTTGATGTGTGGTGCTCAAGGCAGTAAGGTTGTAGTGACAACTCGTGAGAAAACCGTGGCACACACAATGCGTGTAGATGACCCTTATACTTTAAAAGGTTTGACTTCAGAAGAATCTTGGGGTTTGTTGAAGAAGATTGTCTTTGGGGATGATTCCGTTGGAGTAGTAAACCAGGATCTTGAATCAATAGGTAAGAAGATAGCGAAAAAGTGCAAAGGAGTACCATTGGCAATTAGATCATTGGGAGGCATATTACGAAGTAAAAGTAAAGAAATTGAATGGAACAATGTCTTGCAAGGTGACTTATGGAGATTATGCGAAGATGAAAATAGCATCATGCCGGTCCTAAAATTGAGTTACCATAACTTGTCACCTCAACAAAGGGAATGTTTTGCTTATTGCTCTTTATTTCCTAAGGATTGGGAATTTGAGAAGGATGAGTTAATTCAAATGTGGATGGCACAAGGTTATCTTGGTTGTTCAGTTGAGGGGAAATGCATGGAAGATGTTGGTAATCAATTTGTAAATATTTTCTTGACGAATTCATTCTTCCAAGATGCAAAATTGAATGACGATGGTGATGTAATTGGTTTTAAAATGCATGATTTATTGCATGATCTTGCAACAGAAGTAGCTGGCAATGATTTTTGTTACTTGAATAGTAAGGAAAAAAGATGTCTAGGAAGACCTCTGCATGTATCAGTGGTATGTGATGCTTTTTGTAGGTTGGAATCGTTGGATTCAAGTAGATTGCGGTCTTTGATTGTGTTTGATTCCAAAGGCAATAAACAGGGTGGAGTGGAACTATCGGTTATTTCAAATTTCAATTACTTACGCGTCTTGTAG 1725 0.3652 MAEQIPYGVAQSLINGLASVALREFGRINNVKDELESLTKTVESIRAVLLDAENKQEKSLCVQNWVTRLKDVLVAADDLIDEFLIEDMIRKRDEAHKNKVTKVLHSFSLSKAVFCRKMALEIEKIQKGFNDVVKDMSGLNLNSNVVVVEKTNDVRRETSSFVLESNIIGREYDKKKIISLLMQSHENQNVSLVAIVGIGGLGKTALAQLVYNDREVQDLFEKSMWVCVSDNFDVKTILKNMLESLTKNKIDDTLSLDNLQNMLRENLTGKRYLLLLDDVWNKSFEKWDQLMTYLMCGAQGSKVVVTTREKTVAHTMRVDDPYTLKGLTSEESWGLLKKIVFGDDSVGVVNQDLESIGKKIAKKCKGVPLAIRSLGGILRSKSKEIEWNNVLQGDLWRLCEDENSIMPVLKLSYHNLSPQQRECFAYCSLFPKDWEFEKDELIQMWMAQGYLGCSVEGKCMEDVGNQFVNIFLTNSFFQDAKLNDDGDVIGFKMHDLLHDLATEVAGNDFCYLNSKEKRCLGRPLHVSVVCDAFCRLESLDSSRLRSLIVFDSKGNKQGGVELSVISNFNYLRVL* 575
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mtr1g0940 574 CDD RX-CC_like 7 127 IPR038005 -
Mtr1g0940 574 Gene3D - 10 120 - -
Mtr1g0940 574 Pfam NB-ARC domain 170 415 IPR002182 GO:0043531
Mtr1g0940 574 Gene3D - 149 320 IPR027417 -
Mtr1g0940 574 Gene3D - 413 504 IPR036388 -
Mtr1g0940 574 Coils Coil 28 55 - -
Mtr1g0940 574 Pfam Rx N-terminal domain 10 96 IPR041118 -
Mtr1g0940 574 PANTHER DISEASE RESISTANCE PROTEIN RP 32 574 IPR044974 GO:0006952
Mtr1g0940 574 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 151 427 IPR027417 -
Mtr1g0940 574 Gene3D - 326 412 IPR042197 -
Mtr1g0940 574 PANTHER OS05G0414200 PROTEIN 32 574 - -
Mtr1g0940 574 PRINTS Disease resistance protein signature 192 207 - -
Mtr1g0940 574 PRINTS Disease resistance protein signature 266 280 - -
Mtr1g0940 574 PRINTS Disease resistance protein signature 364 378 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mtr1g0940 Mtr-Chr1 10835719 10839602 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mtr1g0940 189 430 WRKY Transcription Factor Family AT5G45050 23.529 5.69e-09 57.4
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mtr1g0940 - - mtr:MTR_8g027540 827.394