Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mtr1g0930 ATGGCTGATACATGTGAAAAAATGAGCAAGGGGCTACGTAAAATTAAGCCTTATCTTGCTATGGTGTCCCTTCAATTTGGCTATGCAGGAATGTACATCATCACTATGGTTTCATTCAAGCATGGCATGAGTCATTGGGTACTCTCTGTGTACCGTCATGTTATTGCTACTATCTTCATGGCCCCTTTTGCCCTTGTCCTTGAAAGAAAAATTAGGCCAAAGATGACACTCCCTATCTTTTTGAGGCTAGCGGTTCTTGGTTTCCTTGAGCCAGTGCTTGATCAAAATTTGTACAACTTGGGAATGAAGAACACCTCAACAACGTTTGCATCTGCCACTGTTAACATTCTGCCAGCAATTACTTTTATAATGGCAATCATTTTCAGGTTAGAAACAGTTAACTTGAAAAAAATTCACAGCATAGCAAAGATAGTTGGAACAGTAGTAACTGTATCAGGAGCAATGGTTATGACATTGTACAAAGGTCCTGCCTTTCAGATCATTAAGGGACAATCATCAAACCAACATGAAAGTGGAACCACTGAGCCAACTGAACAAAACTTTGTGCTTGGCACTATAATGCTCATTTCTAGTTGTGGTGGTTGGGCTAGTTTCTTTATCTTACAATCTTTTACCCTAAAGATGTACCCAGCAGAGCTCTCAATGACAGCTTGGATTTGCTTTTTGGGTATCTTTGAAGGTGGAATTGCAACTCTTATATTTGAACGTGACTTCAGTGTTTGGGCCATAGGTTTTGACTCTAGGCTTCTTGCATGTGTTTACTCTGGTATTGTGTGCTCTGGAATGGCTTACTATGTACAAGGAGTTGTGACAAGAGAACGTGGCCCTGTGTTTGTTACTTCTTTCAGTCCTTTATGTATGATTATCACTGCTGCATTGGGTTCCATTGTCTTGGCTGAGCAAACACATTTGGGAAGTATAATTGGAGCTATTATCATTGTGTGTGGACTTTACACTGTGGTATGGGGGAAAAGCAAAGACAGTGTGAATACAATTGATGCACCAAAAAGTGAGGGACAAGAATTGCCAATTAAGGATGGTACAAGAACAGGGTCAGACATTTTTGAAAGTATTGAGGTCAATGTTCCTAAAGACATGAAGGTTGCTGGAATGAATGTCAAACCATGA 1149 0.4012 MADTCEKMSKGLRKIKPYLAMVSLQFGYAGMYIITMVSFKHGMSHWVLSVYRHVIATIFMAPFALVLERKIRPKMTLPIFLRLAVLGFLEPVLDQNLYNLGMKNTSTTFASATVNILPAITFIMAIIFRLETVNLKKIHSIAKIVGTVVTVSGAMVMTLYKGPAFQIIKGQSSNQHESGTTEPTEQNFVLGTIMLISSCGGWASFFILQSFTLKMYPAELSMTAWICFLGIFEGGIATLIFERDFSVWAIGFDSRLLACVYSGIVCSGMAYYVQGVVTRERGPVFVTSFSPLCMIITAALGSIVLAEQTHLGSIIGAIIIVCGLYTVVWGKSKDSVNTIDAPKSEGQELPIKDGTRTGSDIFESIEVNVPKDMKVAGMNVKP* 383
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mtr1g0930 382 PANTHER WAT1-RELATED PROTEIN 12 358 - -
Mtr1g0930 382 Pfam EamA-like transporter family 29 151 IPR000620 GO:0016020|GO:0016021
Mtr1g0930 382 Pfam EamA-like transporter family 190 328 IPR000620 GO:0016020|GO:0016021
Mtr1g0930 382 SUPERFAMILY Multidrug resistance efflux transporter EmrE 248 332 - -
Mtr1g0930 382 PANTHER WAT1-RELATED PROTEIN 12 358 IPR030184 GO:0016021|GO:0022857
Mtr1g0930 382 SUPERFAMILY Multidrug resistance efflux transporter EmrE 51 152 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mtr1g0930 Mtr-Chr1 10678762 10684555 Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mtr1g0930 12 361 Nodulin-like Gene Family AT1G44800 63.456 1.20e-167 471
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mtr1g0930 - - gmx:100814921 624.78
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Mtr1g0930 1 10678762 10684555 Mtr1g0930 1 10678762 10684555 ECH