Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mtr1g0925 ATGAACAACCCAACTGATCTCAGCTCACCCAATCGCAAACCAGAAGCTGAACAACAACAACAAGGATCATGCACTCCGGAAAACACCTTCAAGAAGAGAAAATCCCCTTCAAAATCCACTCCTCGGAAAAAAACCTCCAGGAATAATACGCCGAAGAAAAACGGGTCGGTTAATGGAGTTAAGGGGACTGGTTCGCCTGATGTGGCTCGGAAAATTGATTTGCGGTTGGAGGCGAAATTGTCAGCTGAGGAAAATTCGAGGATGTTTGCGGGAAGACAAATACATCCGTTCTTTTCATTGTGTAAGGCGGAGAAGAAATTTAAGGATTCGGGTGATTCTGAAAGCAGTTTGTCTGCTGCTAAGCGGGAGAGTGGAAGAACTAACTGTGGTCCTATTCATGTATTTGAAGATATTACGGATGATACTTCATCTCTTGACTGGAGTGACTGGAAATTTTTGGGAAATACCACTATTGTAGATTGTAGCCCAGAAAGTTCAAAATTTTCTGTTATGGAGGATTCTGTTGAACCCTTAAATTTTGATAACTTTCATAGTGGTGTAAAATCCTCAAGCACATCCATTTCTCAGAATGCCTTGTCTTATTCAGACGATAAACTACCTACACAGTCAGAACACATGATGGAAATGTTACCAGAAAACTCAGCTGTAGATAATGAGCCAGCAAAGCCGGAAGATGCTATAGTGGACTTGGAGATGGATGAAGCCAGTACTATATCAGGGCAAGCATGCAATACCGGAAAATCAGATGCTGAGCCACCGAGTAGAATGAGTTCTTTCTGTCAAAGTTGTGAAGATAAGGCTGAGAGCAGCTTATGGATACACAAGTACAAACCAACAAAAGCCTCGGAGGTATGCGGTAATGATGAATCCCTCAATTTCTTACGTGACTGGTTACATCATTGGCATGAAAGGCGGTATCAAAACAGAAAGGATTCCTCTAACAAGGATCAAACTGACATACCAGACGGTGATGGTGATTATAACTGTGCTGGTTGTGACTATGCTTCAAAAGATGTTAGCGAGGAGGGTTCCCTGAAGAATGTTCTTTTAATTACAGGACCAGTTGGGAGTGGCAAGTCTGCAGCTGTCTATGCTTGTGCCCAAGAGCAAGGGTTTGAGGTTTTAGAGCTCAATACATCGGATTGTCGAAATGCGACTGCTGTCAAGCAGTATTTTGGAGATGCTCTTGGATCACAATGTGTCAAAAGTTTAGTGGAACACACTGTGGGTTCACAGAAGAAAACTTTGAAATTGCTCCAAGCTCCAGCTTCGCCTAATGTTAAAGAAGCCAAAGAGATGGATCATGATGTGATTGAAATGATAACCCTATCCGATGATGGAGCTCATGGTCCTGGTGGAACGTCTCAGAAGTTGCACGCCATTGATAATACACTTACATCTGATGCTGTTCAAACTTTAATTTTAGTTGAGGATGTGGACATCCTTTTTCCTGAAGATCGTGGATGTATTGCTGCCATACAACACATTGCCGAAACAGCAAAAGGACCAATTATATTGACCAGCAACAGTAAAAAGGCTGGTCTGCCAAATAACTTTTGTAGACTACATGTTTCTTTCTCATTGCCATTGCCAGATGAGTTGCTTCGTCACTTGTTCACGGTTTGTGCCACAGAAGAAGTCGACGCCAATCCTCTTTTAATGGAGAAGTTTATCCAGTCTTGTGACAGAGATATTCGTAAAACCATTCTGCATCTTCAGTTCTGGTTCCAGAATAAAAAATATAGTAAAGACAAGAAAGTGCAGACATTATATGGCTCACTTCCTTTTGATCTTGAGGCTGGTCATAAGATACTACCGAAGATGATACCCTGGAGTTTTCCCTCAGAGTTATCCAAACTAATTGAGAATGAAGTTACCAAGTCAATAGCTACAATGGAAAACAACTCAAGCTGGGAAGGGTTAGTTAAGGAAGAGCTTTGCATCAATGAGAAGGAAAACAACTCGGAGGTTCCATGTATGGGGACTGATTATTTAGAGTTCATGAAGACGATTAGATCTATTCCAGACCGTGGTGAGTTTGAAAGTCAATATAGTGCTATCTCTGAGTTATATAGTTGTTCTGGACCCTCAGTAACATCCTCTTGGCAAAAGGACCAAAGTAAATTTGTAGTGATGTCCACTGATGCTATGGATAAGGATTCAAATAATAGACATTCTGTAGATGTTCATGACGAAGCTTACAAGAGACAGTTCCTTGAAGGCAATGCTGATTCTTCTTTTAACTTTCTATTGAATCAAAGCTATGCCAGTACGTCTTTTGGTGAGCTACTGCATTCTGGTTTGGAAGATTCAGAGGTGGAACAGTATAAATATTTAGAAACAAATAATGATACATGCTTAAACAACACATATAAATCACTTGATATGTCCTGGTTTCCAGAATCAAGATTTGTTTCCGAGACTGCAATTCAAAACAGAACAGAAACATTGTCTACAGTTGTGTCTTCTGGTGGCCATCTTTCTTGTCCGGTAGATGTTTCTCTGAGTAATGAGCTGAGACCATTCTCTTTCAGCGTTTGTCAGCGCTTGGCCAAAGTGCCTCAAGGTCCCGATTTGTTGGTGACTACTGAAATTCCCAAATCTTCTCCAAGAGCAATAGCACCAGATTTTTGTGATGACAGCATGGAAATCGCAACTGTGTATAACCCGATGGATGAGTGCAGTCACTCTGATTTTAAGTTGGAGTCAAAATTTGTTGATTCTAGTCCATCTATGGAGATCGATACAGTGCAAAATGTGTGGAGGAAACTTCGAACAGATTTGAAACAGCATGCCAAATCAGAACAGATAGGTGCTATCGAAGTTGTTAAGCTTGCTAGTGGGCTAAGCAATCTAATTTCAGAAGCTGACTTGTTGTTTCGTAATCACCAACAAAAACAATGTGGTATTATGGAACCTCCAACTTCCCTGTCTGATGAAGACACGTTTAGTTGGTATGATGAGCAAATGATGATGTCAACTGTTGCTGCACATGGTTTTTGCTTTTATGCCAAGCATATAGCAGAAGCGGGACCGAAATTGGGTTTTGAGGACAGGGTAGACATAACTTCAGAGATGTTGGCTTCTACTGCAAATATTATGGCTTTGGGGAAGTTATCTAGACAGGATCACACCAAAACCACGAGTAGCTATACCAAAGAGCTTTTAGAGGTGAACGACCAGAGAAATGATAAGAGCCTGCGATGCAACGAAAGCAGAACATCTCTGTTCAACGTGATCCGATCGATTGTTCCTGCAAGATCATCAACAACAGCAATTCAAGGCATTGCATTCAGTGAACTTCTTTCGTCACTGCGCCAAATTTCAATTTCAGAGGATTTCCGTATTTCACAAGGTGTTAAAAAGATGAGGAAAGGAAGGCGGAATGCTGAACATTATTTGAGCAGAGGTAAAATGGTGTTGTCTCCTGAAGATATATCATTGTTGTGTGAAGGTGATTTGTACAGAAAGATATCTTCACAGTATGCTTCTAACATGGAAATCAACTGTACATGA 3537 0.4094 MNNPTDLSSPNRKPEAEQQQQGSCTPENTFKKRKSPSKSTPRKKTSRNNTPKKNGSVNGVKGTGSPDVARKIDLRLEAKLSAEENSRMFAGRQIHPFFSLCKAEKKFKDSGDSESSLSAAKRESGRTNCGPIHVFEDITDDTSSLDWSDWKFLGNTTIVDCSPESSKFSVMEDSVEPLNFDNFHSGVKSSSTSISQNALSYSDDKLPTQSEHMMEMLPENSAVDNEPAKPEDAIVDLEMDEASTISGQACNTGKSDAEPPSRMSSFCQSCEDKAESSLWIHKYKPTKASEVCGNDESLNFLRDWLHHWHERRYQNRKDSSNKDQTDIPDGDGDYNCAGCDYASKDVSEEGSLKNVLLITGPVGSGKSAAVYACAQEQGFEVLELNTSDCRNATAVKQYFGDALGSQCVKSLVEHTVGSQKKTLKLLQAPASPNVKEAKEMDHDVIEMITLSDDGAHGPGGTSQKLHAIDNTLTSDAVQTLILVEDVDILFPEDRGCIAAIQHIAETAKGPIILTSNSKKAGLPNNFCRLHVSFSLPLPDELLRHLFTVCATEEVDANPLLMEKFIQSCDRDIRKTILHLQFWFQNKKYSKDKKVQTLYGSLPFDLEAGHKILPKMIPWSFPSELSKLIENEVTKSIATMENNSSWEGLVKEELCINEKENNSEVPCMGTDYLEFMKTIRSIPDRGEFESQYSAISELYSCSGPSVTSSWQKDQSKFVVMSTDAMDKDSNNRHSVDVHDEAYKRQFLEGNADSSFNFLLNQSYASTSFGELLHSGLEDSEVEQYKYLETNNDTCLNNTYKSLDMSWFPESRFVSETAIQNRTETLSTVVSSGGHLSCPVDVSLSNELRPFSFSVCQRLAKVPQGPDLLVTTEIPKSSPRAIAPDFCDDSMEIATVYNPMDECSHSDFKLESKFVDSSPSMEIDTVQNVWRKLRTDLKQHAKSEQIGAIEVVKLASGLSNLISEADLLFRNHQQKQCGIMEPPTSLSDEDTFSWYDEQMMMSTVAAHGFCFYAKHIAEAGPKLGFEDRVDITSEMLASTANIMALGKLSRQDHTKTTSSYTKELLEVNDQRNDKSLRCNESRTSLFNVIRSIVPARSSTTAIQGIAFSELLSSLRQISISEDFRISQGVKKMRKGRRNAEHYLSRGKMVLSPEDISLLCEGDLYRKISSQYASNMEINCT* 1179
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mtr1g0925 1178 PANTHER CHECKPOINT PROTEIN RAD17/RAD24-RELATED 1 1174 - -
Mtr1g0925 1178 MobiDBLite consensus disorder prediction 1 67 - -
Mtr1g0925 1178 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 277 594 IPR027417 -
Mtr1g0925 1178 MobiDBLite consensus disorder prediction 1 30 - -
Mtr1g0925 1178 MobiDBLite consensus disorder prediction 35 49 - -
Mtr1g0925 1178 Gene3D - 276 531 IPR027417 -
Mtr1g0925 1178 Gene3D - 536 598 - -
Mtr1g0925 1178 CDD AAA 344 400 - -
Mtr1g0925 1178 PANTHER CELL CYCLE CHECKPOINT PROTEIN RAD17 1 1174 IPR004582 GO:0006281
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mtr1g0925 Mtr-Chr1 10643883 10652845 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mtr1g0925 275 581 Core DNA Replication Machinery Family AT5G22010 23.248 4.66e-11 65.5
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mtr1g0925 - - gmx:100815984 1285.01
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Mtr1g0925 1 10643883 10652845 Mtr1g0925 1 10643883 10652845 ECH