Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mtr1g0907 ATGAGAGTCTCTTCCTTGCATTTGGAAAATCAAACATTGGGTGGTACTCTTGGACCATCCTTGGGAAATCTAACATTTCTCAGAATACTTAAACTTAAAAAAGTTGACTTGTATGGTAAAATTCCAAAACAAATTGGTCGTTTGAAGCGATTGCAAGTTCTTGTGTTAAGATTTAACCATCTTCAAGGAGAGATTCCCATAGAGCTCACTAATTGCACAAATATTGAGGTAATTGATTTTGCATTGAATCAACTGATCACAGGAAGAATTCCCACATGGTTTGGATCAATGATGCAACTTACTACATTGATTCTCAAGTCAAATAATCTAGTTGGTACCATTCCATCTACCTTGGGAAATGTTTCATCACTACAAACACTAGATTTTACAGAAAATCACTTGGAAGGAAGCATACCTTATTCTTTGGGTAGGTTGTCAGGCTTGACATTGTTGGGTCTAAGTGTAAATAATTGTTCAGGTGAAATCCCTCGTTCTCTTTATAACCTATCAAATATTCAAATTTTTGATCTTGCTTCAAACATGTTATTTGGTAGTCTTCAAACAAACCTTCATCTTGCTTTTCCCAATCTTGAAGAATTATATGTAGGAGGAAACCAAATCAGCGGAACATTTCCATCTTCGGTATCCAACCTCACTGAATTGAAAAGGTTGGATATATCATATAATACTTTTAATGCGCCAATTCCTCTTACTTTGGGTCGATTAAATAAACTTGAGTTGTTTAATATCGGAGCAAATAATTTTGGGAGTGGAGGAGCTCACGATTTGGATTTTCTTTCATCGTTGACCAACTGTACCCAATTGTCAAATATCTTTGTTTTTGGCAATAATTTTGGTGGTGTGTTGCCGAGTTTTATAGGAAACTTTTCCACTAATCTTCGTTTCCTTCATATGGAGAATAATCAAATATATGGAGTGATACCTGAAACAATTGGGCAACTAATTGGTTTAAATTTCTTACAAATTGCAGACAATTTATTTGAGGGAACAATTCCTGATTCAATTGGAAAGCTTAAGAATCTAGGAATATTGGGCTTGGAGAGTAACGAATTCTCCGGTAATATTCCTATAGTCATTGGCAATCTTACTGTGTTGTCTGAACTAGATCTATATGGTAATAAATTGGAAGGAAGCATTCCGATTACCATAAGAAATTGCACCAAATTGCAGTTATTAAACTTTGCTACAAACAAATTAAGTGGTGATATTCCCGATCAAACATTTGGCTATTTAGATGGTTTAATATTTCTTGAATTAGCCAATAATTCCTTGTCCGGTCCCATTCCTTCAGAGTTTGGTAATTTGAAGCAACTTTCACATTTGTATCTAGGCTTGAATAAGTTGTCTGGTGAAATTCCTAAGGAACTAGCTTCTTGCTTAACATTGACAGAACTTTGGTTGGGGGAAAACTTCTTTCATGGAGCTATACCTTTGTTCTTGGGCTCCTCTTTAAGGTCCCTTGAAATATTAGATCTTGCTGAAAATAATTTTTCAAGCATAATCCCCTCTGAACTAGAAAATCTAACATTTTTGAATACTTTGGACTTGTCTTTTAACAATCTCTATGGTGAGGTTCCCACAAGAGGTGTCTTTAGCAAAGTCTCAGCAATTTCACTAACTGGAAACAAGAACCTTTGTGGAGGAATACCTCAATTGAAACTTCCTCCATGTCTTAAGGTACCTGCCAAGAAACACAAGAGATCTCTAAAAAAGAAACTTATCCTCATCAGTGTAATTGGTGGGTTTGTGATCTCTGTCATAGCTTTTATAATTGTTCATTTTCTCACAAGAAAGTCCAAAAGCTTACCATCTTCACCATCTTTGCGAAACGGGAAATTGAGGGTTACTTATGGAGAGCTACATGAATCAACCAATGGTTTTTCTTCTTCCAATTTGGTAGGAACAGGAAGCTTTGGCTCTGTTTACAAAGGATCTCTTCCAAGCTTTGAAAGACCTATTGTTGTAAAGGTGTTGAATCTTGAAACACGTGGAGCAGCAAAGAGTTTCATGGCGGAATGCAATGCTTTAGGAAAGATGAAGCACCGTAATCTTGTCAAAATCCTAACTTGTTGTTCAAGTGTTGATTATAATGGTGAAGATTTCAAGGCTATTGTTTTTGAGTTCATGCCTAAGGGGAGTCTGGAAAAGATTCTGCACGATAACGAAGGGTCTGGAATTCATAATCTCAGCCTGGCACAAAGGTTAGACATCGCTCTTGATCTAGCTCATGCACTTGATTATCTTCACAATGATACAGAGCAAGCCGTAGTTCACTGTGATGTTAAGTCAAGCAACGTTCTTCTTGACGATGACGTTGTAGCCCACTTGGGAGACTTTGGCTTAGCTAGGCTCATTCTTGGAGCCACAGAGCATTCAAGTAAAGATCAAGTCATTTCCTCTACTATTAAAGGAACTATAGGATATATTCCTACTGAGTACGGAACAGGTGTTCCAGTATCACCACAGGGAGATATCTATAGCTTTGGGATTCTTCTGTTAGAGATGCTCACTGGAAAGAGACCAACAAATAACATGTTTTCTGAGAGTCAAAGTCTACATGAATTCTGCAAAATGAAAATTCCAGAAGGAATCCTCGAGATAGTAGATTCACAATTACTTTTGCCATTTGCCGAAGTTGAGACGGGGATTGTGGAAAATAAGATTAAGAAGTGTTTGGTGATGTTTGGTGCAATCGGAGTTGCATGTTCTGAAGAAGTTCCTTCTCATCGAATGTTGATAAAAGATGTTATAGATAAGTTCCTTGAAATAAAACAGAAATTACCTTGCTAG 2811 0.3682 MRVSSLHLENQTLGGTLGPSLGNLTFLRILKLKKVDLYGKIPKQIGRLKRLQVLVLRFNHLQGEIPIELTNCTNIEVIDFALNQLITGRIPTWFGSMMQLTTLILKSNNLVGTIPSTLGNVSSLQTLDFTENHLEGSIPYSLGRLSGLTLLGLSVNNCSGEIPRSLYNLSNIQIFDLASNMLFGSLQTNLHLAFPNLEELYVGGNQISGTFPSSVSNLTELKRLDISYNTFNAPIPLTLGRLNKLELFNIGANNFGSGGAHDLDFLSSLTNCTQLSNIFVFGNNFGGVLPSFIGNFSTNLRFLHMENNQIYGVIPETIGQLIGLNFLQIADNLFEGTIPDSIGKLKNLGILGLESNEFSGNIPIVIGNLTVLSELDLYGNKLEGSIPITIRNCTKLQLLNFATNKLSGDIPDQTFGYLDGLIFLELANNSLSGPIPSEFGNLKQLSHLYLGLNKLSGEIPKELASCLTLTELWLGENFFHGAIPLFLGSSLRSLEILDLAENNFSSIIPSELENLTFLNTLDLSFNNLYGEVPTRGVFSKVSAISLTGNKNLCGGIPQLKLPPCLKVPAKKHKRSLKKKLILISVIGGFVISVIAFIIVHFLTRKSKSLPSSPSLRNGKLRVTYGELHESTNGFSSSNLVGTGSFGSVYKGSLPSFERPIVVKVLNLETRGAAKSFMAECNALGKMKHRNLVKILTCCSSVDYNGEDFKAIVFEFMPKGSLEKILHDNEGSGIHNLSLAQRLDIALDLAHALDYLHNDTEQAVVHCDVKSSNVLLDDDVVAHLGDFGLARLILGATEHSSKDQVISSTIKGTIGYIPTEYGTGVPVSPQGDIYSFGILLLEMLTGKRPTNNMFSESQSLHEFCKMKIPEGILEIVDSQLLLPFAEVETGIVENKIKKCLVMFGAIGVACSEEVPSHRMLIKDVIDKFLEIKQKLPC* 937
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mtr1g0907 936 SUPERFAMILY L domain-like 271 554 - -
Mtr1g0907 936 SUPERFAMILY Protein kinase-like (PK-like) 607 878 IPR011009 -
Mtr1g0907 936 Pfam Protein kinase domain 636 873 IPR000719 GO:0004672|GO:0005524|GO:0006468
Mtr1g0907 936 Gene3D Ribonuclease Inhibitor 261 572 IPR032675 -
Mtr1g0907 936 ProSiteProfiles Leucine-rich repeat profile. 493 516 IPR001611 GO:0005515
Mtr1g0907 936 PANTHER LRR RECEPTOR-LIKE KINASE 1 936 - -
Mtr1g0907 936 Gene3D Transferase(Phosphotransferase) domain 1 716 935 - -
Mtr1g0907 936 ProSiteProfiles Protein kinase domain profile. 634 928 IPR000719 GO:0004672|GO:0005524|GO:0006468
Mtr1g0907 936 SMART serkin_6 634 919 IPR000719 GO:0004672|GO:0005524|GO:0006468
Mtr1g0907 936 SUPERFAMILY L domain-like 2 255 - -
Mtr1g0907 936 Pfam Leucine rich repeat 195 255 IPR001611 GO:0005515
Mtr1g0907 936 Pfam Leucine rich repeat 99 157 IPR001611 GO:0005515
Mtr1g0907 936 ProSitePatterns Serine/Threonine protein kinases active-site signature. 763 775 IPR008271 GO:0004672|GO:0006468
Mtr1g0907 936 SMART LRR_typ_2 442 466 IPR003591 -
Mtr1g0907 936 SMART LRR_typ_2 121 145 IPR003591 -
Mtr1g0907 936 SMART LRR_typ_2 298 321 IPR003591 -
Mtr1g0907 936 SMART LRR_typ_2 515 540 IPR003591 -
Mtr1g0907 936 SMART LRR_typ_2 48 72 IPR003591 -
Mtr1g0907 936 SMART LRR_typ_2 369 393 IPR003591 -
Mtr1g0907 936 SMART LRR_typ_2 194 218 IPR003591 -
Mtr1g0907 936 SMART LRR_typ_2 491 514 IPR003591 -
Mtr1g0907 936 ProSitePatterns Protein kinases ATP-binding region signature. 640 663 IPR017441 GO:0005524
Mtr1g0907 936 Gene3D Ribonuclease Inhibitor 101 260 IPR032675 -
Mtr1g0907 936 Gene3D Ribonuclease Inhibitor 1 100 IPR032675 -
Mtr1g0907 936 PANTHER LEUCINE RICH REPEAT FAMILY PROTEIN, EXPRESSED 1 936 - -
Mtr1g0907 936 Gene3D Phosphorylase Kinase; domain 1 598 715 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mtr1g0907 Mtr-Chr1 10493866 10497215 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mtr1g0907 2 933 Receptor kinase-like Gene Family AT3G47570 42.691 0.0 710
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-XII-1 Mtr1g0907 Pkinase 1.5e-37 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mtr1g0907 - - mtr:MTR_1g029940 1771.13