Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mtr1g0904 ATGGCCTCTTCTAAACTTAACAAAAAAGTGTTTGATTTGAAAGAAGCTTCAACAACAGTTAAAGATTTGAGAATAACGTTTGATTCTGGTAAGACTCGAAGCTATGAATGGAAAGTTTCTCAGTTGAAGGCACTTCTGGAATTAACTGAAAAACATGAGAAAGAGATTGTTGAAGCTCTTTACTCTGACTTATCAAAATCTGAAGCTGAATCCTTCATCCAAGAGGTTGGTATGTTGAAAAACTCATGTAAAACTGCACTCAAAGAATTGAAGCATTGGATGGCTCCGGAAAAGGTCAAAACATCAATCACAACTTTTCCTTCTTCAGCTGAAATAGTATCTGAACCATTTGGAGTTGTGTTGGTCATCTCCGCATGGAACTATCCATTTTTGTTATCACTTGATCCAGTCATTGGAGCTATTGCAGCTGGTAATGCTGTGGTCTTAAAACCATCAGAAATTGCTCCAGCCACATCATCATTGCTGGCAAAACTGTTAGGGGAATACATGGATAACTCATCTATAAGAGTTGTTGAGGGGGCAGTTGATGAAACATCTGCATTACTGCAACAAAAGTGGGACAAAATTTTCTACACAGGTAATGGAAGAGTGGCACGCATTGTGATGGCTGCTGCTGCTAAGCACCTTACACCAGTTGTGCTGGAACTTGGAGGAAAATCACCAGTTGTTGTTGATTCAAATATCAACTTACAGGTGGCAGCTAGAAGGATAATTGCTGGAAAGTGGGGTTGCAACAATGGCCAAGCTTGCATTTCTCCAGATTATATCATAACAACAAAAGATTATGCTCCTAAGTTGGTGGATGCTCTAAAGACCGAATTAGAGCAGTTTTATGGAAAGAATCCATTGGAATCAAAAGATTTGTCGCGTATTGTAAACTCAAACCACTTCGATCGCTTGATAAGGCTTTTGGATGATGATAAAGTTTCTGGTAAGATTGTTCATGGAGGTGAAAAGGATAAAAGCAAATTGAGGATTAGCCCTACTGTTCTATTGGATGTCCCGCGTGATTCTCTGATAATGAGCGAAGAGATATTTGGTCCTTTACTTCCCATCATTACGGTCGATAAACTAGATGAAAGCTTTGATGTGATAAATTCAGCACCGAAGCCTCTTGCTGCATATATATTTACAAACAACAACAAGCTCAAGGAGCAGTTTGTTAAGACTGTTTCTGCTGGTGGTTTGGTCATCAATGACACTACTATACACCTTGCAGTTCATACTTTGCCTTTTGGAGGAGTAGGTGAGAGTGGAGTGGGTGCATACCATGGAAAATTCTCATTTGATGCATTTAGTCACAAAAAAGCAGTTCTTTATCGCAGTTTTTTTGGTGATGCTTCTATTAGGTATCCACCATACACCAGTACAAAGACGAGATTGATGAAGGCTCTCATGGGTGGTGGCTTCCTTGCTATAATTCGTGCCTTATTTGGAAAGTCCTAG 1467 0.396 MASSKLNKKVFDLKEASTTVKDLRITFDSGKTRSYEWKVSQLKALLELTEKHEKEIVEALYSDLSKSEAESFIQEVGMLKNSCKTALKELKHWMAPEKVKTSITTFPSSAEIVSEPFGVVLVISAWNYPFLLSLDPVIGAIAAGNAVVLKPSEIAPATSSLLAKLLGEYMDNSSIRVVEGAVDETSALLQQKWDKIFYTGNGRVARIVMAAAAKHLTPVVLELGGKSPVVVDSNINLQVAARRIIAGKWGCNNGQACISPDYIITTKDYAPKLVDALKTELEQFYGKNPLESKDLSRIVNSNHFDRLIRLLDDDKVSGKIVHGGEKDKSKLRISPTVLLDVPRDSLIMSEEIFGPLLPIITVDKLDESFDVINSAPKPLAAYIFTNNNKLKEQFVKTVSAGGLVINDTTIHLAVHTLPFGGVGESGVGAYHGKFSFDAFSHKKAVLYRSFFGDASIRYPPYTSTKTRLMKALMGGGFLAIIRALFGKS* 489
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mtr1g0904 488 SUPERFAMILY ALDH-like 17 459 IPR016161 GO:0016491
Mtr1g0904 488 CDD ALDH_F3FHI 16 447 - -
Mtr1g0904 488 PANTHER ALDEHYDE DEHYDROGENASE 6 488 - -
Mtr1g0904 488 ProSitePatterns Aldehyde dehydrogenases glutamic acid active site. 221 228 IPR029510 GO:0016491
Mtr1g0904 488 Gene3D Aldehyde Dehydrogenase; Chain A, domain 1 26 443 IPR016162 GO:0016491
Mtr1g0904 488 PIRSF ALDH 3 480 IPR012394 GO:0006081
Mtr1g0904 488 Pfam Aldehyde dehydrogenase family 30 445 IPR015590 GO:0016491
Mtr1g0904 488 Gene3D Aldehyde Dehydrogenase; Chain A, domain 2 225 425 IPR016163 GO:0016620
Mtr1g0904 488 PANTHER ALDEHYDE DEHYDROGENASE 6 488 IPR012394 GO:0006081
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mtr1g0904 Mtr-Chr1 10439590 10448226 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mtr1g0904 11 488 Aldehyde Dehydrogenase Gene Family AT4G34240 68.201 0.0 670
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Mtr1g0904 1 10439590 10448226 Mtr1g0904 1 10439590 10448226 ECH