Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mtr1g0897 ATGATCACCACCTACAACGGTGCCTCCGGTGGCCGTACTGTGGTTGTTGGTGTGAAGATGGAATCTAACAGTCATAGCACTGAGTTGTTGACATGGTCTTTGGTCAATGTTGCTCAACCTGGTGATCTTATTCTTGCTCTTCATGTTCTTAGAAATGATGAAATTGTGAATCGAGATGGGAAATCTTCTTTATTTTCTCTTGTCAAAGCATTTGATTCAGTGCTTTCTGGTTACGAAGGATTCTGCAACTTGAAACAGGTGGATCTGAAGCTAAAAATTTGCCGGGGTTCGTCAGTGAGGAGAATTTTGGTTAGAGAAGCAAATGAATATTGTGCAACTCATGTTATAGTTGGAAAATCTCAAGGTCTTATTAGACCAACTATTTCTTTACCTAGGTATTGTGCTAAGAAGCTATCAAAGGATTGTTGGGTTTTTGCTGTTGATAATGGGAAAGTTGTGTTCAAGAGAGATGGATCACCGACAAATCACGTTGACTTAAAAGGTCACCGAATTGGGTTGCTTGGTTCGATACAACGGACATTCAGCAAGAGTTCAAAAGTACTAAATGATGATGTGGAAGAATCAATATTGCAGGATTCATCTTGCTACCAAGCTGCAGATCAAGAGTCTTATTTCGGCGACGAGGGTGATAGTGAGAAGAACTCGTTGGCTATGGTTCCGGTAAAAGCAACTGATGCTGGTTCTAGCATGAGAACTTTACATGACAGAGAAGTAACTGCTTTAAAACCTGGTTGGCCACTACTCCATCGTACAATTTCGTCAGACAGGAAAGTTTCTGAAAGATCGTTGTTTCGTCGGATTTCAGTGGTCCAATGGGCAATGCAGTTGCCCTCTAGAAATCTTTCCTTTGATAAAGATCAATTTTTGGGTCTAGATAGCAAAAGTGGTGCTCTTGTTCCGGTGAATGCCGAAATAGGAATGGTTGCTTCACCTGAACGCAAATCTATGTGCGTTCCTAAAGAATTAGAGGGCCTTCATGAGAAATACTCATCTACTTGCAGATTGTTTAAGTACCAAGAACTTGTATCAGCAACATCAAACTTCTTGCCGGAAAATTTGATTGGTAAAGGAGGAAGTAGTCGGGTTTATAAAGGTTGCCTCCCTGATGGAAAGGAACTTGCTGTTAAGATCTTAAAGCCTTCTGATGATGTTTTGAAGGAGTTTGTTTTAGAGATAGAAATTATCACCGCTTTGCATCACAAAAACATCATTTCTCTCATTGGATTCTGCTTTGAAGATGACAATCTTCTTTTGGTCTATGATTTCTTATCAAGAGGGAGCCTTGAACAAAACCTTCAGGGTAGTAAGAAAAATTCGCTCGAGTTAGGTTGGACTGAGAGATATAAGGTGGCAATGGGCGTTGCTGAGGCTTTGGAGTATCTGCATAATAACAGTGACCAACCTGTGATCCATCGTGATGTAAAATCATCAAATGTGTTATTATCTGAGGATTTTGAACCTCAGCTCTCTGACTTTGGACTTGCGAAATGGGCATCAACCTCGTCATCATCTATAACCTGCACAGATGTTGCCGGAACTTTTGGTTACTTGGCACCTGAATATTTCATGTATGGTAAAGTAAATGATAAGATTGATGTCTATGCATTTGGTGTGGTGCTTCTTGAGCTTCTTACACGGAGAAAGCCTATAAGTGGCGATTATCCTAAAGGTCAAGAGAGCCTTGTCATGTGGGCAAGTCCAATTCTAAATAGTGGGAAGCTGTCACAATTGTTGGATCCTAGTTTGGGTGATAACTATGATCATGAAGAGATGGAAAGGATGGTCTTAGCAGCAACACTTTGTATCAGACGTGCTCCAGGAGCTAGGCCTCATATGAGTCTTATCTCAAAGGTCCTTAAAGGCGACGCCGTTGTAATAAAGTGGGCAAAGCTAGAAATTAATGCTTTGAAAGCATCAGAATTGCTTGATGAAGAAGCATGTCCACCTTCTGACATACAATCACACCTTAATCTTGCATTGCTTGATGTGGATGATGACACACTCTCCATGTTCAGTGTTGAGCAAAATGTCTCTTTGGAGGACTACTTGAGAGGCAGGTGGAGTCGTTCATCTAGCTTTGATTGA 2106 0.4098 MITTYNGASGGRTVVVGVKMESNSHSTELLTWSLVNVAQPGDLILALHVLRNDEIVNRDGKSSLFSLVKAFDSVLSGYEGFCNLKQVDLKLKICRGSSVRRILVREANEYCATHVIVGKSQGLIRPTISLPRYCAKKLSKDCWVFAVDNGKVVFKRDGSPTNHVDLKGHRIGLLGSIQRTFSKSSKVLNDDVEESILQDSSCYQAADQESYFGDEGDSEKNSLAMVPVKATDAGSSMRTLHDREVTALKPGWPLLHRTISSDRKVSERSLFRRISVVQWAMQLPSRNLSFDKDQFLGLDSKSGALVPVNAEIGMVASPERKSMCVPKELEGLHEKYSSTCRLFKYQELVSATSNFLPENLIGKGGSSRVYKGCLPDGKELAVKILKPSDDVLKEFVLEIEIITALHHKNIISLIGFCFEDDNLLLVYDFLSRGSLEQNLQGSKKNSLELGWTERYKVAMGVAEALEYLHNNSDQPVIHRDVKSSNVLLSEDFEPQLSDFGLAKWASTSSSSITCTDVAGTFGYLAPEYFMYGKVNDKIDVYAFGVVLLELLTRRKPISGDYPKGQESLVMWASPILNSGKLSQLLDPSLGDNYDHEEMERMVLAATLCIRRAPGARPHMSLISKVLKGDAVVIKWAKLEINALKASELLDEEACPPSDIQSHLNLALLDVDDDTLSMFSVEQNVSLEDYLRGRWSRSSSFD* 702
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mtr1g0897 701 Gene3D Phosphorylase Kinase; domain 1 321 429 - -
Mtr1g0897 701 Gene3D Transferase(Phosphotransferase) domain 1 430 637 - -
Mtr1g0897 701 SMART serkin_6 355 598 IPR000719 GO:0004672|GO:0005524|GO:0006468
Mtr1g0897 701 ProSitePatterns Protein kinases ATP-binding region signature. 361 383 IPR017441 GO:0005524
Mtr1g0897 701 PANTHER OS01G0253100 PROTEIN 5 695 IPR045271 GO:0004714|GO:0006468
Mtr1g0897 701 ProSiteProfiles Protein kinase domain profile. 355 621 IPR000719 GO:0004672|GO:0005524|GO:0006468
Mtr1g0897 701 PANTHER ADENINE NUCLEOTIDE ALPHA HYDROLASE-LIKE DOMAIN KINASE 5 695 - -
Mtr1g0897 701 SUPERFAMILY Protein kinase-like (PK-like) 336 625 IPR011009 -
Mtr1g0897 701 ProSitePatterns Serine/Threonine protein kinases active-site signature. 476 488 IPR008271 GO:0004672|GO:0006468
Mtr1g0897 701 Pfam Protein kinase domain 359 564 IPR000719 GO:0004672|GO:0005524|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mtr1g0897 Mtr-Chr1 10336244 10340617 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mtr1g0897 342 622 Trihelix Transcription Factor Family AT1G68690 46.503 1.57e-76 257
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_RLCK-VI Mtr1g0897 Pkinase 4.2e-44 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mtr1g0897 - - aprc:113846853 1058.51
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Mtr1g0897 1 10336244 10340617 Mtr1g0897 1 10336244 10340617 ECH