Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mtr1g0879 ATGTCATTGATTATATCTCCGGAGTTGGCTGACGCGTCGTATGGGAATGCCAAGTTATACTCGTTAAAGGGAGCCGATGTTACACCTGGCTTGTCCTCCCATGATTTTGCTCCTGATAAGCATAGAAGCATGTACATGAATGATTCTTACTCGAGTGAGAGTTACGAAAAGTACTTCCTTGATTCACCTACAGAGGAACTGATAGAACCGTCTAGTTCTGGGATATCAGGAAATTCTGTTCATGCTGATGGTGATTCTTCCTACCAGCTCAGAGCTAATTCAGGAGGTTCTATGATCACTGATAACCCGTTTGATACTTATGTTTCGTCTACAAGGCAGCGTGATGCGTATCAGTCCAACTTTGAATCAGATTTCTTGGAAAGTGAAAGCCCTGATTGTTTTGAATTTGACGGTGATATGCGATTGAAAATACAAGAATTGGAGAGGGCATTGCTTGGTGACAATAATGATGAGTGTGATGACGATGAGGAAAACATGTTTAGGACTGTTCAGAGCATGGAGATTGATCCTGACTTTGCTGAGTGTGCCAATCCCATTCAGAACAAGTCGCATCATGACTCGCCAAAGGAATCGTTGTCCTCAGATTCAAATCTTAGTAGCACCAGTAGCACCAAAGAAATATCACAAAACTTTCCTCGGACCCCGAAGCAATTACTATATGAATGTGCTAGCGCACTTTCAGAAGGAAATGAAGTAAAAGCCTCAGCTATGATCGATGATCTCAGGCAGTTGGTTTCAATTCAGGGAGAACCTTCGGATAGAATTGCAGCCTACATGGTGGAAGGACTTGCTGCTCGTTTGGCTTCATCGGGAAAATGTATTTATAAAGCTTTGAAATGCAAGGAACCTCCGTCTTCTGATCGTCTAGCAGCAATGCAGATACTATTCGAGGTGTGCCCATGTTTTAAGTTTGGATTTATTGCTGCAAATGGTGCTATCTCTGAGGCTATTAAAGATGATAAGAAGGTTCACATTATAGATTTTGATATCAACCAAGGAAGTCAATATATAACCCTGATACAAACACTTGCTTCTAGGCCAGGGAAGCCACCTTATGTGAGATTGACCGGCGTTGATGATCCTGAATCCGTGCAACGATCTGTTGGAGGCCTAAGTATCATAGGACAAAGACTTGAAAAGCTAGCAGAAGTACTCGGATTGCCATTTGAATTTCGAGCCGTAGCATCAAGGTCTTCAATTGTTACTCCATCAATGCTCAACTGTCGTCCCGGGGAAGCCCTTGTGGTGAACTTTGCATTCCAGCTTCATCACATGCCCGACGAAAGTGTATCAACTGTAAACGAACGAGACCAGCTTCTCCGCATGGTTAAGAGCCTTAATCCAAAACTTGTAACAGTTGTGGAACAAGACGTGAACACAAACACTTCCCCATTTCTTCCAAGATTTGTTGAAGCTTACAATTACTACTCTGCTGTGTTTGAGTCCCTTGACGCCACTCTTCCGAGAGAGAGTCAAGATAGGGTGAATGTTGAAAGGCAATGCTTGGCGAGGGACATTGTGAATGTCATTGCTTGCGAGGGCGAGGATAGAATAGAAAGGTATGAAGTCGCTGGAAAATGGAGGGCAAGGATGAAAATGGCTGGATTCACTTCATCACCAATGAGCACAAATGTGAAAGAAGCAATTAGAGAACTCATTAGGCAGTACTGTGACAAGTACAAGATAATAGAGGAAATGGGGGGACTTCATTTTGGGTGGGAAGACAAAAACTTGATTGTTGCTTCAGCATGGAAGTGA 1779 0.4306 MSLIISPELADASYGNAKLYSLKGADVTPGLSSHDFAPDKHRSMYMNDSYSSESYEKYFLDSPTEELIEPSSSGISGNSVHADGDSSYQLRANSGGSMITDNPFDTYVSSTRQRDAYQSNFESDFLESESPDCFEFDGDMRLKIQELERALLGDNNDECDDDEENMFRTVQSMEIDPDFAECANPIQNKSHHDSPKESLSSDSNLSSTSSTKEISQNFPRTPKQLLYECASALSEGNEVKASAMIDDLRQLVSIQGEPSDRIAAYMVEGLAARLASSGKCIYKALKCKEPPSSDRLAAMQILFEVCPCFKFGFIAANGAISEAIKDDKKVHIIDFDINQGSQYITLIQTLASRPGKPPYVRLTGVDDPESVQRSVGGLSIIGQRLEKLAEVLGLPFEFRAVASRSSIVTPSMLNCRPGEALVVNFAFQLHHMPDESVSTVNERDQLLRMVKSLNPKLVTVVEQDVNTNTSPFLPRFVEAYNYYSAVFESLDATLPRESQDRVNVERQCLARDIVNVIACEGEDRIERYEVAGKWRARMKMAGFTSSPMSTNVKEAIRELIRQYCDKYKIIEEMGGLHFGWEDKNLIVASAWK* 593
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mtr1g0879 592 MobiDBLite consensus disorder prediction 199 217 - -
Mtr1g0879 592 PANTHER OSJNBA0084A10.13 PROTEIN-RELATED 10 591 IPR005202 -
Mtr1g0879 592 ProSiteProfiles GRAS family profile. 213 592 IPR005202 -
Mtr1g0879 592 Pfam GRAS domain family 223 592 IPR005202 -
Mtr1g0879 592 MobiDBLite consensus disorder prediction 184 217 - -
Mtr1g0879 592 PANTHER GRAS FAMILY TRANSCRIPTION FACTOR 10 591 IPR030011 GO:0003700|GO:0005634
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mtr1g0879 Mtr-Chr1 10159714 10163346 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mtr1g0879 1 592 GRAS Transcription Factor Family AT1G21450 62.521 0.0 701
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF GRAS Mtr1g0879 GRAS 1.6e-134 CL0063
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mtr1g0879 - - gmx:100807048 918.687
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Mtr1g0879 1 10159714 10163346 Mtr1g0879 1 10159714 10163346 ECH