Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mtr1g0864 ATGCTTCTCACCAAATTATCTTTTAATATTTCAGCTTTGAAAACATATCATATACTTTCTTTACATCCAAATTTCTCTATTCAACCTACAAAAATGAGAAACAAGATGTCCCTTTTGTTCATTGGAGCAATGTTATTTGTTTGTGTTGGAGCTGAACCAGCAGCAGATAAACAAGCTTTGCTTGATTTCCTTCACAAAATGAACCACTCTTCACTTCTCAACTGGAACAAAAAATCTTCTGTATGCAAAAAATGGAATAGAGTTACTTGCAACACTGAAAAATCAAGAGTTATATCTCTTCAGCTACAAAGTCTTGGATTGAATGGTTCAATTCCAGTAAACACTCTTAGTAGACTCTCAGCTCTTGAAAATTTGAGTCTTGCATTTAACAAATTTTCTGGTCCATTGCCATTAGATTTTTCAGTTTGGAAGAATCTAACTGTTGTTGATTTTTCCAACAATTCTTTTAATGGTAGCATTCCTTTATCAGTTTCAAATTTGACTCATCTTACTTCTTTGATTCTAGCTAATAACACTCTTTCTGGTGAAATTCCTGATATCAATGTTCCTAGTCTCAAAGATCTACATTTGGAAAACAATAATCTTAGTGGTTTTGTTCCTAAATCACTTCAAAGATTTCCAAGTTTGGTCTTTTCAGGAAACAATGTTACATATGTAAATGTTTTTCCTGCAAATGTTCATAAAAAAAGGAAAAAAACCAAAGGACTTAAAGAAAAAGCATTATTAGGTATCATCATTGGTGGTTGTGTGCTAGGAATTTTAATTATAGCAGCTTTCTTGATTGTCTGCTGCTATGAGAAACGCGGTGAAGATGGAGAAGTTATTAAGTCTCAGAAGAATAAAGAAGTTTTTTCTGAGAAGAAAGAATCTTCTGAGAGTCTAGAAAGAAACAAAATCGTTTTCTTTGAGGGTTGCAATCTTGTATTTGACTTGGAAGATTTGTTGAGAGCTTCTGCCGAGGTGCTTGGAAAGGGAACATTTGGTACCGTTTATAAGGCTGCTCTGGAGGAAGCAACAACGGTTGCGGTTAAGAGATTGAAGGAGGTTACGGTTGGGAAACGCGAATTTGAACAGCAGATGGAGATGGTGGGAAAGATTAGGCATGAAAATGTGGATGCATTAAGGGCTTATTACTATTCAAAGGAAGAAAAACTTATGGTTTATGATTTTTATGAACAAGGCAGTGTCTCAGCAATGTTACATGGCAAAAGAGGGGTAGAAAGAATTCCTTTAGATTGGGAAAGCAGGTTGAAAATAGCAATTGGTGTAGCAAGAGGCATTGCTCACATTCATGGAGAACAACTAATCCATGGAAACATAAAAGCCTCAAACATCTTCCTCAACTCCAAAGGATATGGTTGTATATCCGACATCGGTCTAGCAACAATGATAACAAGTCCAATATCGCCAAGGGCAGCAGGATACCTTGCGCCAGAAGTAACCGAAACTCGAAAATCAACACCAGCATCCGACGTCTATAGTTTTGGTGTCTTGTTACTTGAACTTTTAACTGGAAAATCTCCTTTACATGGAGGTGAGGAAGTTGTTCATTTGGTTAGGTGGGTTAATTCTGTGGTTAGAGAAGAGTGGACTTCTGAAGTGTTTGATTTAGTCTTATTGAGATATCCTAATATAGAGGAAGAAATGGTTGAGATGTTACAAATTGGTATGGCTTGTGTTGTGAGGTTACATGATGAAAGACCTAAAATGGATGAAGTTGTGAGACTGGTTGAGGAAATTCGAAAGGTTAATAGTGGAAATAGAACATCGACTGAATCTAGATCGGAATGTTCAACTCCAACTCCTCATATTGTCGATGTAAATTAA 1848 0.3615 MLLTKLSFNISALKTYHILSLHPNFSIQPTKMRNKMSLLFIGAMLFVCVGAEPAADKQALLDFLHKMNHSSLLNWNKKSSVCKKWNRVTCNTEKSRVISLQLQSLGLNGSIPVNTLSRLSALENLSLAFNKFSGPLPLDFSVWKNLTVVDFSNNSFNGSIPLSVSNLTHLTSLILANNTLSGEIPDINVPSLKDLHLENNNLSGFVPKSLQRFPSLVFSGNNVTYVNVFPANVHKKRKKTKGLKEKALLGIIIGGCVLGILIIAAFLIVCCYEKRGEDGEVIKSQKNKEVFSEKKESSESLERNKIVFFEGCNLVFDLEDLLRASAEVLGKGTFGTVYKAALEEATTVAVKRLKEVTVGKREFEQQMEMVGKIRHENVDALRAYYYSKEEKLMVYDFYEQGSVSAMLHGKRGVERIPLDWESRLKIAIGVARGIAHIHGEQLIHGNIKASNIFLNSKGYGCISDIGLATMITSPISPRAAGYLAPEVTETRKSTPASDVYSFGVLLLELLTGKSPLHGGEEVVHLVRWVNSVVREEWTSEVFDLVLLRYPNIEEEMVEMLQIGMACVVRLHDERPKMDEVVRLVEEIRKVNSGNRTSTESRSECSTPTPHIVDVN* 616
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mtr1g0864 615 Gene3D Transferase(Phosphotransferase) domain 1 398 607 - -
Mtr1g0864 615 Pfam Leucine rich repeat N-terminal domain 54 91 IPR013210 -
Mtr1g0864 615 ProSitePatterns Protein kinases ATP-binding region signature. 329 360 IPR017441 GO:0005524
Mtr1g0864 615 ProSiteProfiles Protein kinase domain profile. 323 611 IPR000719 GO:0004672|GO:0005524|GO:0006468
Mtr1g0864 615 Gene3D Phosphorylase Kinase; domain 1 287 397 - -
Mtr1g0864 615 SUPERFAMILY Protein kinase-like (PK-like) 327 584 IPR011009 -
Mtr1g0864 615 Pfam Protein tyrosine and serine/threonine kinase 327 582 IPR001245 GO:0004672|GO:0006468
Mtr1g0864 615 SUPERFAMILY L domain-like 68 226 - -
Mtr1g0864 615 PANTHER OS05G0588300 PROTEIN 39 613 - -
Mtr1g0864 615 MobiDBLite consensus disorder prediction 592 615 - -
Mtr1g0864 615 Gene3D Ribonuclease Inhibitor 54 232 IPR032675 -
Mtr1g0864 615 PANTHER LRR RECEPTOR-LIKE KINASE 39 613 - -
Mtr1g0864 615 MobiDBLite consensus disorder prediction 592 609 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mtr1g0864 Mtr-Chr1 9903407 9907189 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mtr1g0864 51 608 Receptor kinase-like Gene Family AT4G23740 54.927 0.0 610
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-III Mtr1g0864 PK_Tyr_Ser-Thr 3.4e-37 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mtr1g0864 - - gmx:100810095 783.867